Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.89■□□□□ 0.93
RNF223E7ERA6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF223E7ERA6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RNF223E7ERA6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF223E7ERA6 KRT8P33-201ENST00000508125 1423 ntBASIC20.88■□□□□ 0.93
RNF223E7ERA6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF223E7ERA6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF223E7ERA6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RNF223E7ERA6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF223E7ERA6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF223E7ERA6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF223E7ERA6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF223E7ERA6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF223E7ERA6 AC010980.1-201ENST00000587192 1142 ntBASIC20.87■□□□□ 0.93
RNF223E7ERA6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF223E7ERA6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF223E7ERA6 AC100797.4-201ENST00000631653 1827 ntBASIC20.87■□□□□ 0.93
RNF223E7ERA6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF223E7ERA6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF223E7ERA6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF223E7ERA6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF223E7ERA6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RNF223E7ERA6 RP9P-202ENST00000450133 1212 ntBASIC20.86■□□□□ 0.93
RNF223E7ERA6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF223E7ERA6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF223E7ERA6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF223E7ERA6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF223E7ERA6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RNF223E7ERA6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RNF223E7ERA6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF223E7ERA6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF223E7ERA6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF223E7ERA6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF223E7ERA6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF223E7ERA6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF223E7ERA6 AC025884.2-201ENST00000553429 711 ntBASIC20.84■□□□□ 0.93
RNF223E7ERA6 AC093536.1-201ENST00000569153 554 ntBASIC20.84■□□□□ 0.93
RNF223E7ERA6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF223E7ERA6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF223E7ERA6 AP004833.2-201ENST00000532228 1454 ntBASIC20.83■□□□□ 0.93
RNF223E7ERA6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF223E7ERA6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF223E7ERA6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF223E7ERA6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
RNF223E7ERA6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF223E7ERA6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF223E7ERA6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF223E7ERA6 AC139795.1-202ENST00000500444 432 ntBASIC20.82■□□□□ 0.92
RNF223E7ERA6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF223E7ERA6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF223E7ERA6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RNF223E7ERA6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF223E7ERA6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF223E7ERA6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF223E7ERA6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF223E7ERA6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF223E7ERA6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF223E7ERA6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF223E7ERA6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF223E7ERA6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF223E7ERA6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF223E7ERA6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF223E7ERA6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF223E7ERA6 SPCS2P3-201ENST00000500401 656 ntBASIC20.8■□□□□ 0.92
RNF223E7ERA6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF223E7ERA6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF223E7ERA6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF223E7ERA6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF223E7ERA6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF223E7ERA6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF223E7ERA6 AC074183.2-201ENST00000623112 922 ntBASIC20.79■□□□□ 0.92
RNF223E7ERA6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF223E7ERA6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF223E7ERA6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF223E7ERA6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF223E7ERA6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RNF223E7ERA6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF223E7ERA6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF223E7ERA6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
RNF223E7ERA6 RAP2CP1-202ENST00000605179 643 ntBASIC20.78■□□□□ 0.92
RNF223E7ERA6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF223E7ERA6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF223E7ERA6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF223E7ERA6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF223E7ERA6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF223E7ERA6 YBX1P4-201ENST00000392794 808 ntBASIC20.77■□□□□ 0.92
RNF223E7ERA6 AL592295.1-201ENST00000400984 884 ntBASIC20.77■□□□□ 0.92
RNF223E7ERA6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF223E7ERA6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF223E7ERA6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF223E7ERA6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF223E7ERA6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF223E7ERA6 AC009299.2-201ENST00000482477 511 ntBASIC20.76■□□□□ 0.91
RNF223E7ERA6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF223E7ERA6 MIR6765-201ENST00000614092 87 ntBASIC20.76■□□□□ 0.91
RNF223E7ERA6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
RNF223E7ERA6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF223E7ERA6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF223E7ERA6 ST7-AS1-201ENST00000456775 1889 ntBASIC20.75■□□□□ 0.91
RNF223E7ERA6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms