Protein–RNA interactions for Protein: A0A0U1RRK4

LOC107984640, Uncharacterized protein, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC107984640A0A0U1RRK4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.36■□□□□ 0.21
LOC107984640A0A0U1RRK4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LOC107984640A0A0U1RRK4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LOC107984640A0A0U1RRK4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LOC107984640A0A0U1RRK4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LOC107984640A0A0U1RRK4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LOC107984640A0A0U1RRK4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.35■□□□□ 0.21
LOC107984640A0A0U1RRK4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LOC107984640A0A0U1RRK4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LOC107984640A0A0U1RRK4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LOC107984640A0A0U1RRK4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LOC107984640A0A0U1RRK4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LOC107984640A0A0U1RRK4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LOC107984640A0A0U1RRK4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC107984640A0A0U1RRK4 LINC01003-201ENST00000564834 1764 ntBASIC16.33■□□□□ 0.2
LOC107984640A0A0U1RRK4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC107984640A0A0U1RRK4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC107984640A0A0U1RRK4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 AC018358.1-201ENST00000631079 1402 ntBASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC107984640A0A0U1RRK4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC107984640A0A0U1RRK4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LOC107984640A0A0U1RRK4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LOC107984640A0A0U1RRK4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC107984640A0A0U1RRK4 AC110285.7-201ENST00000624417 1536 ntBASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 LINC01971-201ENST00000617888 1048 ntBASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.3■□□□□ 0.2
LOC107984640A0A0U1RRK4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.29■□□□□ 0.2
LOC107984640A0A0U1RRK4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LOC107984640A0A0U1RRK4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LOC107984640A0A0U1RRK4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LOC107984640A0A0U1RRK4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LOC107984640A0A0U1RRK4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.27■□□□□ 0.2
LOC107984640A0A0U1RRK4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LOC107984640A0A0U1RRK4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LOC107984640A0A0U1RRK4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LOC107984640A0A0U1RRK4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LOC107984640A0A0U1RRK4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.27■□□□□ 0.19
LOC107984640A0A0U1RRK4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.26■□□□□ 0.19
LOC107984640A0A0U1RRK4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LOC107984640A0A0U1RRK4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LOC107984640A0A0U1RRK4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LOC107984640A0A0U1RRK4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LOC107984640A0A0U1RRK4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LOC107984640A0A0U1RRK4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms