Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.411e-10■□□□□ 9.9
SUB1P53999 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.481e-10■□□□□ 9.9
SUB1P53999 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.481e-10■□□□□ 9.9
SUB1P53999 AC068580.4-204ENST00000427721 1007 ntTSL 211.9□□□□□ -0.51e-10■□□□□ 9.9
SUB1P53999 AC068580.4-202ENST00000636579 350 ntTSL 311.42□□□□□ -0.581e-10■□□□□ 9.9
SUB1P53999 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.861e-10■□□□□ 9.9
SUB1P53999 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.861e-10■□□□□ 9.9
SUB1P53999 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.821e-28■□□□□ 9.9
SUB1P53999 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.045e-8■□□□□ 9.9
SUB1P53999 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC9.59□□□□□ -0.875e-8■□□□□ 9.9
SUB1P53999 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.95e-8■□□□□ 9.9
SUB1P53999 KPNB1-205ENST00000577918 859 ntTSL 310.99□□□□□ -0.652e-9■□□□□ 9.9
SUB1P53999 KPNB1-214ENST00000583648 896 ntTSL 410.89□□□□□ -0.672e-9■□□□□ 9.9
SUB1P53999 UQCRC2-208ENST00000565464 929 ntTSL 57.2□□□□□ -1.262e-9■□□□□ 9.9
SUB1P53999 UQCRC2-210ENST00000567757 538 ntTSL 45.01□□□□□ -1.612e-9■□□□□ 9.9
SUB1P53999 UQCRC2-207ENST00000565331 565 ntTSL 34.48□□□□□ -1.692e-9■□□□□ 9.9
SUB1P53999 KPNB1-204ENST00000577875 605 ntTSL 33.31□□□□□ -1.882e-9■□□□□ 9.9
SUB1P53999 UQCRC2-209ENST00000567597 312 ntTSL 51.83□□□□□ -2.122e-9■□□□□ 9.9
SUB1P53999 RPL5-203ENST00000461952 1116 ntTSL 23.13□□□□□ -1.915e-12■□□□□ 9.9
SUB1P53999 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.42■□□□□ 0.061e-7■□□□□ 9.9
SUB1P53999 AP2M1-206ENST00000432591 802 ntTSL 58.57□□□□□ -1.041e-7■□□□□ 9.9
SUB1P53999 AP2M1-222ENST00000621863 1305 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.091e-7■□□□□ 9.9
SUB1P53999 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.429e-27■□□□□ 9.9
SUB1P53999 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.515e-25■□□□□ 9.9
SUB1P53999 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.24□□□□□ -0.615e-25■□□□□ 9.9
SUB1P53999 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC10.21□□□□□ -0.775e-25■□□□□ 9.9
SUB1P53999 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.15e-25■□□□□ 9.9
SUB1P53999 PCBP2-218ENST00000550585 2543 ntTSL 57.15□□□□□ -1.265e-25■□□□□ 9.9
SUB1P53999 PCBP2-209ENST00000547048 1696 ntTSL 25.02□□□□□ -1.615e-25■□□□□ 9.9
SUB1P53999 GNAS-257ENST00000604005 693 ntTSL 319.53■□□□□ 0.728e-11■□□□□ 9.8
SUB1P53999 GNAS-226ENST00000467321 733 ntTSL 514.19□□□□□ -0.148e-11■□□□□ 9.8
SUB1P53999 GNAS-230ENST00000472183 911 ntTSL 313.28□□□□□ -0.288e-11■□□□□ 9.8
SUB1P53999 GNAS-223ENST00000464788 583 ntTSL 212.53□□□□□ -0.48e-11■□□□□ 9.8
SUB1P53999 GNAS-241ENST00000482112 704 ntTSL 310.08□□□□□ -0.88e-11■□□□□ 9.8
SUB1P53999 GNAS-225ENST00000467227 543 ntTSL 37□□□□□ -1.298e-11■□□□□ 9.8
SUB1P53999 GNAS-227ENST00000468895 583 ntTSL 35.79□□□□□ -1.488e-11■□□□□ 9.8
SUB1P53999 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.79□□□□□ -0.523e-8■□□□□ 9.8
SUB1P53999 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.813e-8■□□□□ 9.8
SUB1P53999 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.813e-8■□□□□ 9.8
SUB1P53999 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.043e-8■□□□□ 9.8
SUB1P53999 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.043e-8■□□□□ 9.8
SUB1P53999 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.267e-18■□□□□ 9.8
SUB1P53999 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.272e-9■□□□□ 9.8
SUB1P53999 MRPL20-204ENST00000487659 1693 ntTSL 211.36□□□□□ -0.597e-18■□□□□ 9.8
SUB1P53999 MRPL20-206ENST00000493287 504 ntTSL 25.06□□□□□ -1.67e-18■□□□□ 9.8
SUB1P53999 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.87■□□□□ 0.778e-11■□□□□ 9.8
SUB1P53999 OXSR1-202ENST00000426620 1581 ntTSL 1 (best)19.63■□□□□ 0.738e-11■□□□□ 9.8
SUB1P53999 OXSR1-206ENST00000492714 471 ntTSL 316.09■□□□□ 0.178e-11■□□□□ 9.8
SUB1P53999 ATP5B-206ENST00000550162 863 ntTSL 210.14□□□□□ -0.798e-11■□□□□ 9.8
SUB1P53999 FUS-203ENST00000474990 827 ntTSL 316.7■□□□□ 0.262e-6■□□□□ 9.8
SUB1P53999 GNAS-236ENST00000479025 466 ntTSL 210.31□□□□□ -0.762e-8■□□□□ 9.8
SUB1P53999 TCP1-214ENST00000543532 561 ntTSL 418.02■□□□□ 0.485e-7■□□□□ 9.8
SUB1P53999 TCP1-209ENST00000538128 557 ntTSL 417.27■□□□□ 0.365e-7■□□□□ 9.8
SUB1P53999 TCP1-208ENST00000537390 691 ntTSL 515.62■□□□□ 0.095e-7■□□□□ 9.8
SUB1P53999 TCP1-206ENST00000536607 572 ntTSL 213.78□□□□□ -0.25e-7■□□□□ 9.8
SUB1P53999 TCP1-213ENST00000543517 561 ntTSL 413.59□□□□□ -0.235e-7■□□□□ 9.8
SUB1P53999 TCP1-210ENST00000538530 918 ntTSL 511.82□□□□□ -0.525e-7■□□□□ 9.8
SUB1P53999 TCP1-212ENST00000539948 706 ntTSL 35.85□□□□□ -1.475e-7■□□□□ 9.8
SUB1P53999 TCP1-205ENST00000536394 535 ntTSL 43.22□□□□□ -1.895e-7■□□□□ 9.8
SUB1P53999 TCP1-216ENST00000545764 709 ntTSL 22.54□□□□□ -25e-7■□□□□ 9.8
SUB1P53999 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.231e-8■□□□□ 9.8
SUB1P53999 GMPR-203ENST00000543191 675 ntTSL 27.75□□□□□ -1.171e-8■□□□□ 9.8
SUB1P53999 CYC1-204ENST00000533444 1832 ntTSL 1 (best)21.58■■□□□ 1.053e-6■□□□□ 9.8
SUB1P53999 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.163e-6■□□□□ 9.8
SUB1P53999 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC9.97□□□□□ -0.814e-12■□□□□ 9.8
SUB1P53999 SF3B3-208ENST00000567250 1084 ntTSL 39.44□□□□□ -0.96e-8■□□□□ 9.8
SUB1P53999 MARS-231ENST00000553123 724 ntTSL 26.04□□□□□ -1.441e-6■□□□□ 9.8
SUB1P53999 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.052e-6■□□□□ 9.7
SUB1P53999 CHCHD10-203ENST00000517886 494 ntTSL 315.37■□□□□ 0.052e-6■□□□□ 9.7
SUB1P53999 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.34□□□□□ -0.112e-6■□□□□ 9.7
SUB1P53999 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC10.38□□□□□ -0.752e-6■□□□□ 9.7
SUB1P53999 CHCHD10-205ENST00000523865 490 ntTSL 25.64□□□□□ -1.512e-6■□□□□ 9.7
SUB1P53999 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)17.63■□□□□ 0.411e-6■□□□□ 9.7
SUB1P53999 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.011e-6■□□□□ 9.7
SUB1P53999 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)11.19□□□□□ -0.621e-6■□□□□ 9.7
SUB1P53999 MAN2A2-202ENST00000557865 2671 ntTSL 210.52□□□□□ -0.731e-6■□□□□ 9.7
SUB1P53999 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.741e-6■□□□□ 9.7
SUB1P53999 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.94e-12■□□□□ 9.7
SUB1P53999 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.684e-12■□□□□ 9.7
SUB1P53999 CFL1-205ENST00000526975 567 ntTSL 313.96□□□□□ -0.174e-12■□□□□ 9.7
SUB1P53999 CFL1-215ENST00000534784 737 ntTSL 313.84□□□□□ -0.194e-12■□□□□ 9.7
SUB1P53999 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.24e-12■□□□□ 9.7
SUB1P53999 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.324e-12■□□□□ 9.7
SUB1P53999 RHOC-212ENST00000468093 1042 ntTSL 311.76□□□□□ -0.534e-12■□□□□ 9.7
SUB1P53999 CFL1-209ENST00000530413 647 ntTSL 1 (best)10.95□□□□□ -0.664e-12■□□□□ 9.7
SUB1P53999 RHOC-213ENST00000473074 943 ntTSL 510.93□□□□□ -0.664e-12■□□□□ 9.7
SUB1P53999 RHOC-205ENST00000369636 786 ntTSL 2 BASIC10.31□□□□□ -0.764e-12■□□□□ 9.7
SUB1P53999 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.764e-12■□□□□ 9.7
SUB1P53999 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.764e-12■□□□□ 9.7
SUB1P53999 CFL1-212ENST00000531413 636 ntTSL 3 BASIC10.26□□□□□ -0.774e-12■□□□□ 9.7
SUB1P53999 CFL1-214ENST00000534769 758 ntTSL 2 BASIC10.07□□□□□ -0.84e-12■□□□□ 9.7
SUB1P53999 CFL1-213ENST00000532134 855 ntTSL 59.6□□□□□ -0.874e-12■□□□□ 9.7
SUB1P53999 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.385e-13■□□□□ 9.7
SUB1P53999 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.45□□□□□ -0.425e-13■□□□□ 9.7
SUB1P53999 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.425e-13■□□□□ 9.7
SUB1P53999 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.062e-6■□□□□ 9.7
SUB1P53999 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.212e-6■□□□□ 9.7
SUB1P53999 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.342e-6■□□□□ 9.7
SUB1P53999 HSPG2-207ENST00000453796 621 ntTSL 210.89□□□□□ -0.673e-7■□□□□ 9.7
SUB1P53999 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.73e-6■□□□□ 9.7
Retrieved 100 of 11,644 protein–RNA pairs in 192.2 ms