RNA–Protein interactions for RNA: ENST00000344843.11

MRPL20-201, Transcript of mitochondrial ribosomal protein L20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL20, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL20-201ENST00000344843 NISCHQ9Y2I1 1504 aa45.02■■■■■ 4.8
MRPL20-201ENST00000344843 CCDC180Q9P1Z9 1646 aa40.15■■■■■ 4.02
MRPL20-201ENST00000344843 ABCC9O60706 1549 aa39.91■■■■□ 3.98
MRPL20-201ENST00000344843 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
MRPL20-201ENST00000344843 NACADO15069 1562 aa37.89■■■■□ 3.66
MRPL20-201ENST00000344843 DCAF8L2P0C7V8 631 aa37.86■■■■□ 3.65
MRPL20-201ENST00000344843 MYO15BQ96JP2 1530 aa37.49■■■■□ 3.59
MRPL20-201ENST00000344843 ZCCHC6Q5VYS8 1495 aaKnown RBP37.39■■■■□ 3.58
MRPL20-201ENST00000344843 PABPN1Q86U42 306 aaKnown RBP eCLIP37.25■■■■□ 3.55
MRPL20-201ENST00000344843 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
MRPL20-201ENST00000344843 DNAJC5BQ9UF47 199 aa37.19■■■■□ 3.54
MRPL20-201ENST00000344843 DCAF1Q9Y4B6 1507 aa37.16■■■■□ 3.54
MRPL20-201ENST00000344843 BICRAQ9NZM4 1560 aa37.03■■■■□ 3.52
MRPL20-201ENST00000344843 SCRIBQ14160 1630 aa36.69■■■■□ 3.46
MRPL20-201ENST00000344843 SHROOM4Q9ULL8 1493 aa36.44■■■■□ 3.42
MRPL20-201ENST00000344843 EIF4G1Q04637 1599 aaKnown RBP36.05■■■■□ 3.36
MRPL20-201ENST00000344843 CC2D2AQ9P2K1 1620 aa36.04■■■■□ 3.36
MRPL20-201ENST00000344843 CECR2Q9BXF3 1484 aa35.88■■■■□ 3.33
MRPL20-201ENST00000344843 NCAPD3P42695 1498 aa35.03■■■■□ 3.2
MRPL20-201ENST00000344843 SMARCA4P51532 1647 aa35.02■■■■□ 3.2
MRPL20-201ENST00000344843 ATAD2BQ9ULI0 1458 aa34.99■■■■□ 3.19
MRPL20-201ENST00000344843 BAZ1AQ9NRL2 1556 aaPredicted RBP34.87■■■■□ 3.17
MRPL20-201ENST00000344843 SMARCA2P51531 1590 aa34.85■■■■□ 3.17
MRPL20-201ENST00000344843 HMGXB3Q12766 1538 aa34.76■■■■□ 3.16
MRPL20-201ENST00000344843 MROH2BQ7Z745 1585 aa34.73■■■■□ 3.15
MRPL20-201ENST00000344843 PEG3Q9GZU2 1588 aa34.66■■■■□ 3.14
MRPL20-201ENST00000344843 BAZ1BQ9UIG0 1483 aaKnown RBP34.64■■■■□ 3.14
MRPL20-201ENST00000344843 NESP48681 1621 aa34.41■■■■□ 3.1
MRPL20-201ENST00000344843 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
MRPL20-201ENST00000344843 WIZO95785 1651 aa34.31■■■■□ 3.08
MRPL20-201ENST00000344843 CUX2O14529 1486 aa34.17■■■■□ 3.06
MRPL20-201ENST00000344843 RSF1Q96T23 1441 aaPredicted RBP34.14■■■■□ 3.06
MRPL20-201ENST00000344843 LAMC3Q9Y6N6 1575 aa34.13■■■■□ 3.05
MRPL20-201ENST00000344843 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
MRPL20-201ENST00000344843 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
MRPL20-201ENST00000344843 PDS5BQ9NTI5 1447 aa33.93■■■■□ 3.02
MRPL20-201ENST00000344843 KIF21AQ7Z4S6 1674 aa33.91■■■■□ 3.02
MRPL20-201ENST00000344843 TOP2AP11388 1531 aaKnown RBP33.87■■■■□ 3.01
MRPL20-201ENST00000344843 DNAJC5Q9H3Z4 198 aa33.78■■■■□ 3
MRPL20-201ENST00000344843 CFTRP13569 1480 aa33.68■■■□□ 2.98
MRPL20-201ENST00000344843 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
MRPL20-201ENST00000344843 FANCD2Q9BXW9 1451 aa33.59■■■□□ 2.97
MRPL20-201ENST00000344843 CEP164Q9UPV0 1460 aa33.57■■■□□ 2.97
MRPL20-201ENST00000344843 WDR62O43379 1518 aa33.55■■■□□ 2.96
MRPL20-201ENST00000344843 CCDC88BA6NC98 1476 aa33.53■■■□□ 2.96
MRPL20-201ENST00000344843 URB2Q14146 1524 aaKnown RBP33.33■■■□□ 2.93
MRPL20-201ENST00000344843 PRDM2Q13029 1718 aa33.26■■■□□ 2.92
MRPL20-201ENST00000344843 TOPBP1Q92547 1522 aa33.01■■■□□ 2.87
MRPL20-201ENST00000344843 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
MRPL20-201ENST00000344843 DNMBPQ6XZF7 1577 aa32.89■■■□□ 2.86
MRPL20-201ENST00000344843 ABCC8Q09428 1581 aa32.88■■■□□ 2.85
MRPL20-201ENST00000344843 IFT140Q96RY7 1462 aa32.88■■■□□ 2.85
MRPL20-201ENST00000344843 ZNF608Q9ULD9 1512 aaPredicted RBP32.87■■■□□ 2.85
MRPL20-201ENST00000344843 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.83
MRPL20-201ENST00000344843 OSCARQ8IYS5 282 aa32.69■■■□□ 2.82
MRPL20-201ENST00000344843 TARBP1Q13395 1621 aaKnown RBP32.68■■■□□ 2.82
MRPL20-201ENST00000344843 EIF4G3O43432 1585 aaKnown RBP32.65■■■□□ 2.82
MRPL20-201ENST00000344843 AQRO60306 1485 aaKnown RBP eCLIP32.61■■■□□ 2.811e-7■■■■■ 29.6
MRPL20-201ENST00000344843 RAD54L2Q9Y4B4 1467 aa32.61■■■□□ 2.81
MRPL20-201ENST00000344843 CUX1P39880 1505 aa32.6■■■□□ 2.81
MRPL20-201ENST00000344843 SOGA1O94964 1423 aa32.55■■■□□ 2.8
MRPL20-201ENST00000344843 FGD5Q6ZNL6 1462 aa32.54■■■□□ 2.8
MRPL20-201ENST00000344843 TRIM41Q8WV44 630 aa32.48■■■□□ 2.79
MRPL20-201ENST00000344843 TDRD9Q8NDG6 1382 aaKnown RBP32.47■■■□□ 2.79
MRPL20-201ENST00000344843 CHD1O14646 1710 aa32.31■■■□□ 2.76
MRPL20-201ENST00000344843 FBLN2P98095 1184 aa32.3■■■□□ 2.76
MRPL20-201ENST00000344843 WDR97A6NE52 1622 aa32.29■■■□□ 2.76
MRPL20-201ENST00000344843 SNAPC4Q5SXM2 1469 aa32.27■■■□□ 2.76
MRPL20-201ENST00000344843 RIMBP3CA6NJZ7 1639 aa32.24■■■□□ 2.75
MRPL20-201ENST00000344843 RIMBP3BA6NNM3 1639 aa32.24■■■□□ 2.75
MRPL20-201ENST00000344843 RIMBP3Q9UFD9 1639 aa32.24■■■□□ 2.75
MRPL20-201ENST00000344843 GRIN2BQ13224 1484 aa32.2■■■□□ 2.75
MRPL20-201ENST00000344843 ABCA10Q8WWZ4 1543 aa32.19■■■□□ 2.74
MRPL20-201ENST00000344843 ARHGEF11O15085 1522 aa32.18■■■□□ 2.74
MRPL20-201ENST00000344843 WRNQ14191 1432 aaPredicted RBP eCLIP32.17■■■□□ 2.74
MRPL20-201ENST00000344843 GAPVD1Q14C86 1478 aa32.16■■■□□ 2.74
MRPL20-201ENST00000344843 MAGI1Q96QZ7 1491 aaPredicted RBP32.15■■■□□ 2.74
MRPL20-201ENST00000344843 SYNJ1O43426 1573 aa32.15■■■□□ 2.74
MRPL20-201ENST00000344843 TOP2BQ02880 1626 aa32.13■■■□□ 2.73
MRPL20-201ENST00000344843 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
MRPL20-201ENST00000344843 CHMP7Q8WUX9 453 aaPredicted RBP32.1■■■□□ 2.73
MRPL20-201ENST00000344843 ABCA5Q8WWZ7 1642 aa32.1■■■□□ 2.73
MRPL20-201ENST00000344843 PBRM1Q86U86 1689 aa32.08■■■□□ 2.73
MRPL20-201ENST00000344843 SYNJ2O15056 1496 aa32.05■■■□□ 2.72
MRPL20-201ENST00000344843 CLASP1Q7Z460 1538 aa31.99■■■□□ 2.71
MRPL20-201ENST00000344843 CYB5RLQ6IPT4 315 aa31.95■■■□□ 2.71
MRPL20-201ENST00000344843 ARAP1Q96P48 1450 aa31.92■■■□□ 2.7
MRPL20-201ENST00000344843 ADAMTS12P58397 1594 aa31.83■■■□□ 2.69
MRPL20-201ENST00000344843 GRIN2AQ12879 1464 aa31.8■■■□□ 2.68
MRPL20-201ENST00000344843 ERICH3Q5RHP9 1530 aa31.76■■■□□ 2.68
MRPL20-201ENST00000344843 FHAD1B1AJZ9 1412 aa31.75■■■□□ 2.67
MRPL20-201ENST00000344843 CEP170Q5SW79 1584 aa31.69■■■□□ 2.66
MRPL20-201ENST00000344843 NUP160Q12769 1436 aa31.69■■■□□ 2.66
MRPL20-201ENST00000344843 ERCC6L2Q5T890 1561 aa31.58■■■□□ 2.65
MRPL20-201ENST00000344843 IGF1RP08069 1367 aa31.51■■■□□ 2.63
MRPL20-201ENST00000344843 KIF27Q86VH2 1401 aa31.5■■■□□ 2.63
MRPL20-201ENST00000344843 SHROOM2Q13796 1616 aa31.48■■■□□ 2.63
MRPL20-201ENST00000344843 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
MRPL20-201ENST00000344843 JPH4Q96JJ6 628 aa31.38■■■□□ 2.61
MRPL20-201ENST00000344843 RUSC2Q8N2Y8 1516 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms