RNA–Protein interactions for RNA: ENST00000473074.1

RHOC-213, Transcript of ras homolog family member C, humanhuman

TSL 5

Gene RHOC, Length 943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOC-213ENST00000473074 NISCHQ9Y2I1 1504 aa33.56■■■□□ 2.96
RHOC-213ENST00000473074 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
RHOC-213ENST00000473074 ABCC9O60706 1549 aa28.69■■■□□ 2.18
RHOC-213ENST00000473074 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
RHOC-213ENST00000473074 DCAF8L2P0C7V8 631 aa27.93■■■□□ 2.06
RHOC-213ENST00000473074 NACADO15069 1562 aa27.74■■■□□ 2.03
RHOC-213ENST00000473074 RB1CC1Q8TDY2 1594 aa27.71■■■□□ 2.03
RHOC-213ENST00000473074 DCAF1Q9Y4B6 1507 aa27.71■■■□□ 2.03
RHOC-213ENST00000473074 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
RHOC-213ENST00000473074 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
RHOC-213ENST00000473074 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
RHOC-213ENST00000473074 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
RHOC-213ENST00000473074 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
RHOC-213ENST00000473074 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
RHOC-213ENST00000473074 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
RHOC-213ENST00000473074 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
RHOC-213ENST00000473074 SMARCA4P51532 1647 aa26■■□□□ 1.75
RHOC-213ENST00000473074 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
RHOC-213ENST00000473074 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
RHOC-213ENST00000473074 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
RHOC-213ENST00000473074 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
RHOC-213ENST00000473074 WIZO95785 1651 aa25.74■■□□□ 1.71
RHOC-213ENST00000473074 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
RHOC-213ENST00000473074 ATAD2BQ9ULI0 1458 aa25.7■■□□□ 1.7
RHOC-213ENST00000473074 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
RHOC-213ENST00000473074 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
RHOC-213ENST00000473074 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
RHOC-213ENST00000473074 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
RHOC-213ENST00000473074 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
RHOC-213ENST00000473074 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
RHOC-213ENST00000473074 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
RHOC-213ENST00000473074 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
RHOC-213ENST00000473074 NESP48681 1621 aa24.97■■□□□ 1.59
RHOC-213ENST00000473074 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
RHOC-213ENST00000473074 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
RHOC-213ENST00000473074 PRDM2Q13029 1718 aa24.82■■□□□ 1.56
RHOC-213ENST00000473074 CFTRP13569 1480 aa24.8■■□□□ 1.56
RHOC-213ENST00000473074 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
RHOC-213ENST00000473074 ERCC6Q03468 1493 aa24.64■■□□□ 1.54
RHOC-213ENST00000473074 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.54
RHOC-213ENST00000473074 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.53
RHOC-213ENST00000473074 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
RHOC-213ENST00000473074 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
RHOC-213ENST00000473074 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
RHOC-213ENST00000473074 ABCC8Q09428 1581 aa24.4■■□□□ 1.5
RHOC-213ENST00000473074 URB2Q14146 1524 aaKnown RBP24.39■■□□□ 1.49
RHOC-213ENST00000473074 WDR62O43379 1518 aa24.34■■□□□ 1.49
RHOC-213ENST00000473074 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
RHOC-213ENST00000473074 CUX1P39880 1505 aa24.3■■□□□ 1.48
RHOC-213ENST00000473074 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
RHOC-213ENST00000473074 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
RHOC-213ENST00000473074 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.476e-6■■■□□ 16.7
RHOC-213ENST00000473074 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
RHOC-213ENST00000473074 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
RHOC-213ENST00000473074 CUX2O14529 1486 aa24.16■■□□□ 1.46
RHOC-213ENST00000473074 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
RHOC-213ENST00000473074 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
RHOC-213ENST00000473074 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
RHOC-213ENST00000473074 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
RHOC-213ENST00000473074 SOGA1O94964 1423 aa24■■□□□ 1.43
RHOC-213ENST00000473074 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
RHOC-213ENST00000473074 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
RHOC-213ENST00000473074 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
RHOC-213ENST00000473074 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
RHOC-213ENST00000473074 ZNF608Q9ULD9 1512 aaPredicted RBP23.93■■□□□ 1.42
RHOC-213ENST00000473074 EIF4G3O43432 1585 aaKnown RBP23.87■■□□□ 1.41
RHOC-213ENST00000473074 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
RHOC-213ENST00000473074 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
RHOC-213ENST00000473074 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.41e-7■■■■□ 23.9
RHOC-213ENST00000473074 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
RHOC-213ENST00000473074 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
RHOC-213ENST00000473074 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
RHOC-213ENST00000473074 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
RHOC-213ENST00000473074 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
RHOC-213ENST00000473074 GRIN2BQ13224 1484 aa23.65■■□□□ 1.38
RHOC-213ENST00000473074 SNAPC4Q5SXM2 1469 aa23.62■■□□□ 1.37
RHOC-213ENST00000473074 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
RHOC-213ENST00000473074 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
RHOC-213ENST00000473074 CHD1O14646 1710 aa23.56■■□□□ 1.36
RHOC-213ENST00000473074 ADAMTS12P58397 1594 aa23.55■■□□□ 1.36
RHOC-213ENST00000473074 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
RHOC-213ENST00000473074 IGF1RP08069 1367 aa23.52■■□□□ 1.36
RHOC-213ENST00000473074 CUL7Q14999 1698 aa23.51■■□□□ 1.35
RHOC-213ENST00000473074 EEA1Q15075 1411 aa23.47■■□□□ 1.35
RHOC-213ENST00000473074 FBLN2P98095 1184 aa23.46■■□□□ 1.35
RHOC-213ENST00000473074 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
RHOC-213ENST00000473074 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
RHOC-213ENST00000473074 CARMIL1Q5VZK9 1371 aa23.41■■□□□ 1.34
RHOC-213ENST00000473074 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
RHOC-213ENST00000473074 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
RHOC-213ENST00000473074 GRIN2AQ12879 1464 aa23.38■■□□□ 1.33
RHOC-213ENST00000473074 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
RHOC-213ENST00000473074 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.33
RHOC-213ENST00000473074 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
RHOC-213ENST00000473074 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
RHOC-213ENST00000473074 KIF21BO75037 1637 aa23.3■■□□□ 1.32
RHOC-213ENST00000473074 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
RHOC-213ENST00000473074 NUP160Q12769 1436 aa23.23■■□□□ 1.31
RHOC-213ENST00000473074 CTTNBP2Q8WZ74 1663 aa23.22■■□□□ 1.31
RHOC-213ENST00000473074 CLASP1Q7Z460 1538 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms