RNA–Protein interactions for RNA: ENST00000547048.5

PCBP2-209, Transcript of poly(rC) binding protein 2, humanhuman

TSL 2

Gene PCBP2, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-209ENST00000547048 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
PCBP2-209ENST00000547048 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
PCBP2-209ENST00000547048 SENP3Q9H4L4 574 aaPredicted RBP15.81■□□□□ 0.12
PCBP2-209ENST00000547048 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
PCBP2-209ENST00000547048 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
PCBP2-209ENST00000547048 FOXD1Q16676 465 aa14.62□□□□□ -0.07
PCBP2-209ENST00000547048 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
PCBP2-209ENST00000547048 PLPPR3Q6T4P5 718 aa14.21□□□□□ -0.13
PCBP2-209ENST00000547048 MSH5O43196 834 aa13.77□□□□□ -0.21
PCBP2-209ENST00000547048 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
PCBP2-209ENST00000547048 ADRA2BP18089 450 aa13.7□□□□□ -0.22
PCBP2-209ENST00000547048 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
PCBP2-209ENST00000547048 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
PCBP2-209ENST00000547048 ABCC9O60706 1549 aa13.15□□□□□ -0.3
PCBP2-209ENST00000547048 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
PCBP2-209ENST00000547048 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.36
PCBP2-209ENST00000547048 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
PCBP2-209ENST00000547048 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.38
PCBP2-209ENST00000547048 NACADO15069 1562 aa12.7□□□□□ -0.38
PCBP2-209ENST00000547048 DCAF1Q9Y4B6 1507 aa12.63□□□□□ -0.39
PCBP2-209ENST00000547048 MYO15BQ96JP2 1530 aa12.63□□□□□ -0.39
PCBP2-209ENST00000547048 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
PCBP2-209ENST00000547048 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
PCBP2-209ENST00000547048 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
PCBP2-209ENST00000547048 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
PCBP2-209ENST00000547048 UNC13AQ9UPW8 1703 aa12.42□□□□□ -0.42
PCBP2-209ENST00000547048 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCBP2-209ENST00000547048 BICRAQ9NZM4 1560 aa12.27□□□□□ -0.44
PCBP2-209ENST00000547048 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
PCBP2-209ENST00000547048 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
PCBP2-209ENST00000547048 NCBP3Q53F19 620 aaKnown RBP12.1□□□□□ -0.47
PCBP2-209ENST00000547048 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
PCBP2-209ENST00000547048 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
PCBP2-209ENST00000547048 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
PCBP2-209ENST00000547048 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
PCBP2-209ENST00000547048 CECR2Q9BXF3 1484 aa11.9□□□□□ -0.5
PCBP2-209ENST00000547048 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
PCBP2-209ENST00000547048 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
PCBP2-209ENST00000547048 BAZ1AQ9NRL2 1556 aaPredicted RBP11.87□□□□□ -0.51
PCBP2-209ENST00000547048 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
PCBP2-209ENST00000547048 MROH2BQ7Z745 1585 aa11.8□□□□□ -0.52
PCBP2-209ENST00000547048 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
PCBP2-209ENST00000547048 SMARCA2P51531 1590 aa11.75□□□□□ -0.53
PCBP2-209ENST00000547048 CACNB1Q02641 598 aaPredicted RBP11.74□□□□□ -0.53
PCBP2-209ENST00000547048 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
PCBP2-209ENST00000547048 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.54
PCBP2-209ENST00000547048 WIZO95785 1651 aa11.7□□□□□ -0.54
PCBP2-209ENST00000547048 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
PCBP2-209ENST00000547048 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
PCBP2-209ENST00000547048 BAZ1BQ9UIG0 1483 aaKnown RBP11.69□□□□□ -0.54
PCBP2-209ENST00000547048 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
PCBP2-209ENST00000547048 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
PCBP2-209ENST00000547048 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
PCBP2-209ENST00000547048 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
PCBP2-209ENST00000547048 KCNA4P22459 653 aa11.59□□□□□ -0.55
PCBP2-209ENST00000547048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.553e-9■□□□□ 8.4
PCBP2-209ENST00000547048 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
PCBP2-209ENST00000547048 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
PCBP2-209ENST00000547048 NESP48681 1621 aa11.41□□□□□ -0.58
PCBP2-209ENST00000547048 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
PCBP2-209ENST00000547048 CADPSQ9ULU8 1353 aa11.38□□□□□ -0.59
PCBP2-209ENST00000547048 ERCC6Q03468 1493 aa11.36□□□□□ -0.59
PCBP2-209ENST00000547048 CFTRP13569 1480 aa11.33□□□□□ -0.6
PCBP2-209ENST00000547048 PDS5BQ9NTI5 1447 aa11.32□□□□□ -0.6
PCBP2-209ENST00000547048 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
PCBP2-209ENST00000547048 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
PCBP2-209ENST00000547048 FANCD2Q9BXW9 1451 aa11.27□□□□□ -0.61
PCBP2-209ENST00000547048 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
PCBP2-209ENST00000547048 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
PCBP2-209ENST00000547048 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
PCBP2-209ENST00000547048 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
PCBP2-209ENST00000547048 APLP2Q06481 763 aa11.18□□□□□ -0.62
PCBP2-209ENST00000547048 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
PCBP2-209ENST00000547048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
PCBP2-209ENST00000547048 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
PCBP2-209ENST00000547048 WDR62O43379 1518 aa11.14□□□□□ -0.63
PCBP2-209ENST00000547048 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
PCBP2-209ENST00000547048 CUX2O14529 1486 aa11.13□□□□□ -0.63
PCBP2-209ENST00000547048 CAPN15O75808 1086 aa11.11□□□□□ -0.63
PCBP2-209ENST00000547048 ABCC8Q09428 1581 aa11.1□□□□□ -0.63
PCBP2-209ENST00000547048 DNMBPQ6XZF7 1577 aa11.1□□□□□ -0.63
PCBP2-209ENST00000547048 TOPBP1Q92547 1522 aa11.1□□□□□ -0.63
PCBP2-209ENST00000547048 CUX1P39880 1505 aa11.06□□□□□ -0.64
PCBP2-209ENST00000547048 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
PCBP2-209ENST00000547048 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
PCBP2-209ENST00000547048 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
PCBP2-209ENST00000547048 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
PCBP2-209ENST00000547048 SYNJ1O43426 1573 aa11.03□□□□□ -0.64
PCBP2-209ENST00000547048 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
PCBP2-209ENST00000547048 TOP2BQ02880 1626 aa11.02□□□□□ -0.65
PCBP2-209ENST00000547048 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
PCBP2-209ENST00000547048 BIVM-ERCC5R4GMW8 1640 aa11.01□□□□□ -0.65
PCBP2-209ENST00000547048 POTEHQ6S545 545 aa11□□□□□ -0.65
PCBP2-209ENST00000547048 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
PCBP2-209ENST00000547048 SOGA1O94964 1423 aa10.98□□□□□ -0.65
PCBP2-209ENST00000547048 ZNF219Q9P2Y4 722 aaPredicted RBP10.98□□□□□ -0.65
PCBP2-209ENST00000547048 DSG3P32926 999 aa10.97□□□□□ -0.65
PCBP2-209ENST00000547048 RAD54L2Q9Y4B4 1467 aa10.97□□□□□ -0.65
PCBP2-209ENST00000547048 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.66
PCBP2-209ENST00000547048 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms