RNA–Protein interactions for RNA: ENST00000550585.5

PCBP2-218, Transcript of poly(rC) binding protein 2, humanhuman

TSL 5

Gene PCBP2, Length 2,543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-218ENST00000550585 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
PCBP2-218ENST00000550585 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
PCBP2-218ENST00000550585 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
PCBP2-218ENST00000550585 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
PCBP2-218ENST00000550585 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
PCBP2-218ENST00000550585 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
PCBP2-218ENST00000550585 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
PCBP2-218ENST00000550585 HRCP23327 699 aa15.31■□□□□ 0.04
PCBP2-218ENST00000550585 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
PCBP2-218ENST00000550585 MYT1Q01538 1121 aa15.02□□□□□ -0.01
PCBP2-218ENST00000550585 ABCC9O60706 1549 aa14.86□□□□□ -0.03
PCBP2-218ENST00000550585 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
PCBP2-218ENST00000550585 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
PCBP2-218ENST00000550585 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
PCBP2-218ENST00000550585 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
PCBP2-218ENST00000550585 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
PCBP2-218ENST00000550585 NACADO15069 1562 aa14.67□□□□□ -0.06
PCBP2-218ENST00000550585 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
PCBP2-218ENST00000550585 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
PCBP2-218ENST00000550585 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
PCBP2-218ENST00000550585 RB1CC1Q8TDY2 1594 aa14.48□□□□□ -0.09
PCBP2-218ENST00000550585 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
PCBP2-218ENST00000550585 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
PCBP2-218ENST00000550585 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
PCBP2-218ENST00000550585 LOC105371045A0A1W2PR82 267 aa14.37□□□□□ -0.11
PCBP2-218ENST00000550585 WIZO95785 1651 aa14.34□□□□□ -0.11
PCBP2-218ENST00000550585 TRIM26Q12899 539 aaPredicted RBP14.3□□□□□ -0.12
PCBP2-218ENST00000550585 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
PCBP2-218ENST00000550585 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
PCBP2-218ENST00000550585 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
PCBP2-218ENST00000550585 ACIN1Q9UKV3 1341 aaKnown RBP14.2□□□□□ -0.14
PCBP2-218ENST00000550585 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
PCBP2-218ENST00000550585 FAM9AQ8IZU1 332 aaPredicted RBP14.17□□□□□ -0.14
PCBP2-218ENST00000550585 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
PCBP2-218ENST00000550585 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
PCBP2-218ENST00000550585 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
PCBP2-218ENST00000550585 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
PCBP2-218ENST00000550585 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
PCBP2-218ENST00000550585 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
PCBP2-218ENST00000550585 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
PCBP2-218ENST00000550585 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
PCBP2-218ENST00000550585 EIF4G1Q04637 1599 aaKnown RBP14.03□□□□□ -0.16
PCBP2-218ENST00000550585 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
PCBP2-218ENST00000550585 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
PCBP2-218ENST00000550585 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
PCBP2-218ENST00000550585 PEG3Q9GZU2 1588 aa13.87□□□□□ -0.19
PCBP2-218ENST00000550585 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
PCBP2-218ENST00000550585 SOGA1O94964 1423 aa13.78□□□□□ -0.2
PCBP2-218ENST00000550585 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
PCBP2-218ENST00000550585 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
PCBP2-218ENST00000550585 DIEXFQ68CQ4 756 aaKnown RBP13.77□□□□□ -0.21
PCBP2-218ENST00000550585 BCL11AQ9H165 835 aa13.75□□□□□ -0.21
PCBP2-218ENST00000550585 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
PCBP2-218ENST00000550585 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.21
PCBP2-218ENST00000550585 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
PCBP2-218ENST00000550585 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
PCBP2-218ENST00000550585 APLP2Q06481 763 aa13.67□□□□□ -0.22
PCBP2-218ENST00000550585 EEA1Q15075 1411 aa13.62□□□□□ -0.23
PCBP2-218ENST00000550585 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
PCBP2-218ENST00000550585 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
PCBP2-218ENST00000550585 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
PCBP2-218ENST00000550585 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
PCBP2-218ENST00000550585 NCAPD3P42695 1498 aa13.58□□□□□ -0.23
PCBP2-218ENST00000550585 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.23
PCBP2-218ENST00000550585 HMGXB3Q12766 1538 aa13.56□□□□□ -0.24
PCBP2-218ENST00000550585 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
PCBP2-218ENST00000550585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.24
PCBP2-218ENST00000550585 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
PCBP2-218ENST00000550585 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
PCBP2-218ENST00000550585 CLSPNQ9HAW4 1339 aa13.5□□□□□ -0.25
PCBP2-218ENST00000550585 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
PCBP2-218ENST00000550585 YTHDC1Q96MU7 727 aaKnown RBP13.47□□□□□ -0.25
PCBP2-218ENST00000550585 KIF21BO75037 1637 aa13.46□□□□□ -0.25
PCBP2-218ENST00000550585 ZNF316A6NFI3 1004 aaPredicted RBP13.45□□□□□ -0.26
PCBP2-218ENST00000550585 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
PCBP2-218ENST00000550585 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
PCBP2-218ENST00000550585 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
PCBP2-218ENST00000550585 CFTRP13569 1480 aa13.43□□□□□ -0.26
PCBP2-218ENST00000550585 CUX1P39880 1505 aa13.43□□□□□ -0.26
PCBP2-218ENST00000550585 CLIP1P30622 1438 aa13.4□□□□□ -0.26
PCBP2-218ENST00000550585 CC2D2AQ9P2K1 1620 aa13.37□□□□□ -0.27
PCBP2-218ENST00000550585 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
PCBP2-218ENST00000550585 MIER1Q8N108 512 aa13.33□□□□□ -0.28
PCBP2-218ENST00000550585 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.28
PCBP2-218ENST00000550585 SUPT16HQ9Y5B9 1047 aaKnown RBP13.33□□□□□ -0.28
PCBP2-218ENST00000550585 PRXQ9BXM0 1461 aa13.31□□□□□ -0.28
PCBP2-218ENST00000550585 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
PCBP2-218ENST00000550585 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
PCBP2-218ENST00000550585 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
PCBP2-218ENST00000550585 ERICH3Q5RHP9 1530 aa13.27□□□□□ -0.28
PCBP2-218ENST00000550585 CUX2O14529 1486 aa13.23□□□□□ -0.29
PCBP2-218ENST00000550585 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
PCBP2-218ENST00000550585 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
PCBP2-218ENST00000550585 ARAP1Q96P48 1450 aa13.21□□□□□ -0.29
PCBP2-218ENST00000550585 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
PCBP2-218ENST00000550585 NESP48681 1621 aa13.2□□□□□ -0.3
PCBP2-218ENST00000550585 IGF1RP08069 1367 aa13.19□□□□□ -0.3
PCBP2-218ENST00000550585 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
PCBP2-218ENST00000550585 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
PCBP2-218ENST00000550585 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms