RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
CTSD-211ENST00000637387 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
CTSD-211ENST00000637387 ABCC9O60706 1549 aa30.94■■■□□ 2.54
CTSD-211ENST00000637387 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
CTSD-211ENST00000637387 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
CTSD-211ENST00000637387 NACADO15069 1562 aa29.48■■■□□ 2.31
CTSD-211ENST00000637387 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
CTSD-211ENST00000637387 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
CTSD-211ENST00000637387 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
CTSD-211ENST00000637387 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
CTSD-211ENST00000637387 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
CTSD-211ENST00000637387 DNAJC5BQ9UF47 199 aa28.85■■■□□ 2.21
CTSD-211ENST00000637387 BICRAQ9NZM4 1560 aa28.77■■■□□ 2.2
CTSD-211ENST00000637387 SHROOM4Q9ULL8 1493 aa28.67■■■□□ 2.18
CTSD-211ENST00000637387 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
CTSD-211ENST00000637387 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
CTSD-211ENST00000637387 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
CTSD-211ENST00000637387 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
CTSD-211ENST00000637387 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
CTSD-211ENST00000637387 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
CTSD-211ENST00000637387 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
CTSD-211ENST00000637387 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
CTSD-211ENST00000637387 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
CTSD-211ENST00000637387 WIZO95785 1651 aa27.27■■□□□ 1.96
CTSD-211ENST00000637387 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
CTSD-211ENST00000637387 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
CTSD-211ENST00000637387 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
CTSD-211ENST00000637387 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
CTSD-211ENST00000637387 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
CTSD-211ENST00000637387 TOP2AP11388 1531 aaKnown RBP26.96■■□□□ 1.91
CTSD-211ENST00000637387 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
CTSD-211ENST00000637387 NESP48681 1621 aa26.68■■□□□ 1.86
CTSD-211ENST00000637387 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
CTSD-211ENST00000637387 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
CTSD-211ENST00000637387 CUX2O14529 1486 aa26.59■■□□□ 1.85
CTSD-211ENST00000637387 LAMC3Q9Y6N6 1575 aa26.55■■□□□ 1.84
CTSD-211ENST00000637387 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
CTSD-211ENST00000637387 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
CTSD-211ENST00000637387 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
CTSD-211ENST00000637387 KIF21AQ7Z4S6 1674 aa26.32■■□□□ 1.8
CTSD-211ENST00000637387 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
CTSD-211ENST00000637387 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
CTSD-211ENST00000637387 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
CTSD-211ENST00000637387 CFTRP13569 1480 aa26.18■■□□□ 1.78
CTSD-211ENST00000637387 MRC2Q9UBG0 1479 aa26.14■■□□□ 1.77
CTSD-211ENST00000637387 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
CTSD-211ENST00000637387 WDR62O43379 1518 aa26.08■■□□□ 1.77
CTSD-211ENST00000637387 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
CTSD-211ENST00000637387 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
CTSD-211ENST00000637387 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
CTSD-211ENST00000637387 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
CTSD-211ENST00000637387 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.72
CTSD-211ENST00000637387 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
CTSD-211ENST00000637387 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
CTSD-211ENST00000637387 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
CTSD-211ENST00000637387 CUX1P39880 1505 aa25.71■■□□□ 1.71
CTSD-211ENST00000637387 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
CTSD-211ENST00000637387 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
CTSD-211ENST00000637387 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
CTSD-211ENST00000637387 ZNF608Q9ULD9 1512 aaPredicted RBP25.49■■□□□ 1.67
CTSD-211ENST00000637387 SOGA1O94964 1423 aa25.42■■□□□ 1.66
CTSD-211ENST00000637387 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
CTSD-211ENST00000637387 OSCARQ8IYS5 282 aa25.41■■□□□ 1.66
CTSD-211ENST00000637387 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
CTSD-211ENST00000637387 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
CTSD-211ENST00000637387 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
CTSD-211ENST00000637387 EIF4G3O43432 1585 aaKnown RBP25.34■■□□□ 1.65
CTSD-211ENST00000637387 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
CTSD-211ENST00000637387 EEA1Q15075 1411 aa25.3■■□□□ 1.64
CTSD-211ENST00000637387 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.641e-6■■■■■ 31.1
CTSD-211ENST00000637387 RAD54L2Q9Y4B4 1467 aa25.28■■□□□ 1.64
CTSD-211ENST00000637387 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
CTSD-211ENST00000637387 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
CTSD-211ENST00000637387 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
CTSD-211ENST00000637387 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
CTSD-211ENST00000637387 KIF21BO75037 1637 aa25.13■■□□□ 1.61
CTSD-211ENST00000637387 LOC105371045A0A1W2PR82 267 aa25.11■■□□□ 1.61
CTSD-211ENST00000637387 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
CTSD-211ENST00000637387 CHD1O14646 1710 aa25.09■■□□□ 1.61
CTSD-211ENST00000637387 CSRNP3Q8WYN3 585 aa25.08■■□□□ 1.61
CTSD-211ENST00000637387 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
CTSD-211ENST00000637387 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
CTSD-211ENST00000637387 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
CTSD-211ENST00000637387 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
CTSD-211ENST00000637387 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
CTSD-211ENST00000637387 FBLN2P98095 1184 aa25.01■■□□□ 1.59
CTSD-211ENST00000637387 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
CTSD-211ENST00000637387 PRXQ9BXM0 1461 aa25■■□□□ 1.59
CTSD-211ENST00000637387 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
CTSD-211ENST00000637387 PBRM1Q86U86 1689 aa24.98■■□□□ 1.59
CTSD-211ENST00000637387 ERICH3Q5RHP9 1530 aa24.97■■□□□ 1.59
CTSD-211ENST00000637387 GOLGA3Q08378 1498 aa24.97■■□□□ 1.59
CTSD-211ENST00000637387 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
CTSD-211ENST00000637387 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
CTSD-211ENST00000637387 IGF1RP08069 1367 aa24.93■■□□□ 1.58
CTSD-211ENST00000637387 CUL7Q14999 1698 aa24.92■■□□□ 1.58
CTSD-211ENST00000637387 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
CTSD-211ENST00000637387 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
CTSD-211ENST00000637387 EHMT2Q96KQ7 1210 aa24.89■■□□□ 1.58
CTSD-211ENST00000637387 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms