RNA–Protein interactions for RNA: ENST00000479025.1

GNAS-236, Transcript of GNAS complex locus, humanhuman

TSL 2

Gene GNAS, Length 466 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-236ENST00000479025 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
GNAS-236ENST00000479025 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
GNAS-236ENST00000479025 ABCC9O60706 1549 aa28.97■■■□□ 2.23
GNAS-236ENST00000479025 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
GNAS-236ENST00000479025 NACADO15069 1562 aa27.87■■■□□ 2.05
GNAS-236ENST00000479025 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
GNAS-236ENST00000479025 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
GNAS-236ENST00000479025 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
GNAS-236ENST00000479025 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
GNAS-236ENST00000479025 UNC13AQ9UPW8 1703 aa27.28■■□□□ 1.96
GNAS-236ENST00000479025 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
GNAS-236ENST00000479025 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
GNAS-236ENST00000479025 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.92
GNAS-236ENST00000479025 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
GNAS-236ENST00000479025 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
GNAS-236ENST00000479025 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
GNAS-236ENST00000479025 CC2D2AQ9P2K1 1620 aa26.24■■□□□ 1.79
GNAS-236ENST00000479025 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
GNAS-236ENST00000479025 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
GNAS-236ENST00000479025 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
GNAS-236ENST00000479025 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
GNAS-236ENST00000479025 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
GNAS-236ENST00000479025 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
GNAS-236ENST00000479025 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
GNAS-236ENST00000479025 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
GNAS-236ENST00000479025 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
GNAS-236ENST00000479025 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
GNAS-236ENST00000479025 WIZO95785 1651 aa25.39■■□□□ 1.65
GNAS-236ENST00000479025 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
GNAS-236ENST00000479025 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
GNAS-236ENST00000479025 NESP48681 1621 aa25.08■■□□□ 1.61
GNAS-236ENST00000479025 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
GNAS-236ENST00000479025 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
GNAS-236ENST00000479025 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
GNAS-236ENST00000479025 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
GNAS-236ENST00000479025 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
GNAS-236ENST00000479025 CFTRP13569 1480 aa24.82■■□□□ 1.56
GNAS-236ENST00000479025 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
GNAS-236ENST00000479025 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
GNAS-236ENST00000479025 CUX2O14529 1486 aa24.76■■□□□ 1.55
GNAS-236ENST00000479025 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
GNAS-236ENST00000479025 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
GNAS-236ENST00000479025 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
GNAS-236ENST00000479025 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
GNAS-236ENST00000479025 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
GNAS-236ENST00000479025 WDR62O43379 1518 aa24.56■■□□□ 1.52
GNAS-236ENST00000479025 URB2Q14146 1524 aaKnown RBP24.44■■□□□ 1.5
GNAS-236ENST00000479025 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
GNAS-236ENST00000479025 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
GNAS-236ENST00000479025 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
GNAS-236ENST00000479025 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
GNAS-236ENST00000479025 CUX1P39880 1505 aa24.1■■□□□ 1.45
GNAS-236ENST00000479025 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
GNAS-236ENST00000479025 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
GNAS-236ENST00000479025 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
GNAS-236ENST00000479025 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
GNAS-236ENST00000479025 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
GNAS-236ENST00000479025 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
GNAS-236ENST00000479025 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
GNAS-236ENST00000479025 SOGA1O94964 1423 aa23.93■■□□□ 1.42
GNAS-236ENST00000479025 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
GNAS-236ENST00000479025 BIVM-ERCC5R4GMW8 1640 aa23.9■■□□□ 1.42
GNAS-236ENST00000479025 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
GNAS-236ENST00000479025 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
GNAS-236ENST00000479025 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
GNAS-236ENST00000479025 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.413e-20■■■■□ 25.9
GNAS-236ENST00000479025 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
GNAS-236ENST00000479025 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
GNAS-236ENST00000479025 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
GNAS-236ENST00000479025 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
GNAS-236ENST00000479025 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
GNAS-236ENST00000479025 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
GNAS-236ENST00000479025 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
GNAS-236ENST00000479025 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
GNAS-236ENST00000479025 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
GNAS-236ENST00000479025 CHD1O14646 1710 aa23.62■■□□□ 1.37
GNAS-236ENST00000479025 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
GNAS-236ENST00000479025 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
GNAS-236ENST00000479025 FBLN2P98095 1184 aa23.49■■□□□ 1.35
GNAS-236ENST00000479025 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
GNAS-236ENST00000479025 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
GNAS-236ENST00000479025 CLASP1Q7Z460 1538 aa23.41■■□□□ 1.34
GNAS-236ENST00000479025 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
GNAS-236ENST00000479025 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
GNAS-236ENST00000479025 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
GNAS-236ENST00000479025 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
GNAS-236ENST00000479025 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
GNAS-236ENST00000479025 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
GNAS-236ENST00000479025 ARHGEF11O15085 1522 aa23.33■■□□□ 1.33
GNAS-236ENST00000479025 IGF1RP08069 1367 aa23.31■■□□□ 1.32
GNAS-236ENST00000479025 NUP160Q12769 1436 aa23.31■■□□□ 1.32
GNAS-236ENST00000479025 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
GNAS-236ENST00000479025 CUL7Q14999 1698 aa23.28■■□□□ 1.32
GNAS-236ENST00000479025 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
GNAS-236ENST00000479025 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
GNAS-236ENST00000479025 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
GNAS-236ENST00000479025 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
GNAS-236ENST00000479025 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
GNAS-236ENST00000479025 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
GNAS-236ENST00000479025 KIAA0586Q9BVV6 1533 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms