Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX49Q9Y6V7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.89■■■□□ 2.38
DDX49Q9Y6V7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.89■■■□□ 2.38
DDX49Q9Y6V7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX49Q9Y6V7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX49Q9Y6V7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.88■■■□□ 2.37
DDX49Q9Y6V7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.87■■■□□ 2.37
DDX49Q9Y6V7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.87■■■□□ 2.37
DDX49Q9Y6V7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
DDX49Q9Y6V7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
DDX49Q9Y6V7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
DDX49Q9Y6V7 AC010864.1-201ENST00000609407 1511 ntBASIC29.86■■■□□ 2.37
DDX49Q9Y6V7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX49Q9Y6V7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
DDX49Q9Y6V7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX49Q9Y6V7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX49Q9Y6V7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DDX49Q9Y6V7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
DDX49Q9Y6V7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DDX49Q9Y6V7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
DDX49Q9Y6V7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
DDX49Q9Y6V7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.84■■■□□ 2.37
DDX49Q9Y6V7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
DDX49Q9Y6V7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
DDX49Q9Y6V7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.84■■■□□ 2.37
DDX49Q9Y6V7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX49Q9Y6V7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
DDX49Q9Y6V7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX49Q9Y6V7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
DDX49Q9Y6V7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.83■■■□□ 2.37
DDX49Q9Y6V7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.83■■■□□ 2.37
DDX49Q9Y6V7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
DDX49Q9Y6V7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.82■■■□□ 2.36
DDX49Q9Y6V7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.82■■■□□ 2.36
DDX49Q9Y6V7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
DDX49Q9Y6V7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
DDX49Q9Y6V7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L13-201ENST00000554103 1267 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L15-201ENST00000611059 1267 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L23-201ENST00000615195 1269 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L24-201ENST00000617576 1269 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L22-201ENST00000618238 1269 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L20-201ENST00000619712 1269 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L21-201ENST00000622058 1269 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L10-201ENST00000622460 1267 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DUX4L25-201ENST00000624915 1269 ntBASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX49Q9Y6V7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
DDX49Q9Y6V7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX49Q9Y6V7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.8■■■□□ 2.36
DDX49Q9Y6V7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.8■■■□□ 2.36
DDX49Q9Y6V7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX49Q9Y6V7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX49Q9Y6V7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.79■■■□□ 2.36
DDX49Q9Y6V7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
DDX49Q9Y6V7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.79■■■□□ 2.36
DDX49Q9Y6V7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
DDX49Q9Y6V7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
DDX49Q9Y6V7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
DDX49Q9Y6V7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.78■■■□□ 2.36
DDX49Q9Y6V7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.78■■■□□ 2.36
DDX49Q9Y6V7 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.77■■■□□ 2.36
DDX49Q9Y6V7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
DDX49Q9Y6V7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.76■■■□□ 2.36
DDX49Q9Y6V7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
DDX49Q9Y6V7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.76■■■□□ 2.35
DDX49Q9Y6V7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
DDX49Q9Y6V7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX49Q9Y6V7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX49Q9Y6V7 HSD17B1P1-201ENST00000590052 955 ntBASIC29.73■■■□□ 2.35
DDX49Q9Y6V7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
DDX49Q9Y6V7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.72■■■□□ 2.35
DDX49Q9Y6V7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.72■■■□□ 2.35
DDX49Q9Y6V7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
DDX49Q9Y6V7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
DDX49Q9Y6V7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.71■■■□□ 2.35
DDX49Q9Y6V7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
DDX49Q9Y6V7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
DDX49Q9Y6V7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.7■■■□□ 2.35
DDX49Q9Y6V7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.7■■■□□ 2.35
DDX49Q9Y6V7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.7■■■□□ 2.34
DDX49Q9Y6V7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.7■■■□□ 2.34
DDX49Q9Y6V7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
DDX49Q9Y6V7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
DDX49Q9Y6V7 AL449106.1-201ENST00000608517 1980 ntBASIC29.68■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms