Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSDC2Q9Y534 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSDC2Q9Y534 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.34■□□□□ 0.37
CSDC2Q9Y534 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.34■□□□□ 0.37
CSDC2Q9Y534 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CSDC2Q9Y534 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSDC2Q9Y534 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.34■□□□□ 0.37
CSDC2Q9Y534 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSDC2Q9Y534 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSDC2Q9Y534 AC145676.1-201ENST00000514988 2004 ntBASIC17.33■□□□□ 0.36
CSDC2Q9Y534 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSDC2Q9Y534 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSDC2Q9Y534 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSDC2Q9Y534 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.31■□□□□ 0.36
CSDC2Q9Y534 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSDC2Q9Y534 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSDC2Q9Y534 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSDC2Q9Y534 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSDC2Q9Y534 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSDC2Q9Y534 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSDC2Q9Y534 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.3■□□□□ 0.36
CSDC2Q9Y534 AC108673.1-201ENST00000510422 1159 ntBASIC17.3■□□□□ 0.36
CSDC2Q9Y534 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSDC2Q9Y534 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSDC2Q9Y534 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSDC2Q9Y534 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CSDC2Q9Y534 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.3■□□□□ 0.36
CSDC2Q9Y534 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSDC2Q9Y534 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CSDC2Q9Y534 LINC00273-201ENST00000539813 1452 ntBASIC17.29■□□□□ 0.36
CSDC2Q9Y534 WHAMMP2-203ENST00000563942 1603 ntBASIC17.29■□□□□ 0.36
CSDC2Q9Y534 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CSDC2Q9Y534 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSDC2Q9Y534 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSDC2Q9Y534 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.28■□□□□ 0.36
CSDC2Q9Y534 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.28■□□□□ 0.36
CSDC2Q9Y534 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CSDC2Q9Y534 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSDC2Q9Y534 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CSDC2Q9Y534 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.27■□□□□ 0.36
CSDC2Q9Y534 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.27■□□□□ 0.35
CSDC2Q9Y534 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSDC2Q9Y534 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSDC2Q9Y534 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSDC2Q9Y534 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSDC2Q9Y534 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSDC2Q9Y534 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.25■□□□□ 0.35
CSDC2Q9Y534 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSDC2Q9Y534 AC005559.1-201ENST00000589661 871 ntBASIC17.25■□□□□ 0.35
CSDC2Q9Y534 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSDC2Q9Y534 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.25■□□□□ 0.35
CSDC2Q9Y534 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSDC2Q9Y534 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSDC2Q9Y534 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSDC2Q9Y534 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSDC2Q9Y534 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CSDC2Q9Y534 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSDC2Q9Y534 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSDC2Q9Y534 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSDC2Q9Y534 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CSDC2Q9Y534 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CSDC2Q9Y534 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.23■□□□□ 0.35
CSDC2Q9Y534 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.23■□□□□ 0.35
CSDC2Q9Y534 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSDC2Q9Y534 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSDC2Q9Y534 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.22■□□□□ 0.35
CSDC2Q9Y534 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSDC2Q9Y534 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSDC2Q9Y534 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSDC2Q9Y534 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CSDC2Q9Y534 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSDC2Q9Y534 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSDC2Q9Y534 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSDC2Q9Y534 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.21■□□□□ 0.35
CSDC2Q9Y534 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSDC2Q9Y534 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSDC2Q9Y534 DUSP8P4-201ENST00000399538 1761 ntBASIC17.21■□□□□ 0.35
CSDC2Q9Y534 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSDC2Q9Y534 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSDC2Q9Y534 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSDC2Q9Y534 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.2■□□□□ 0.34
CSDC2Q9Y534 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSDC2Q9Y534 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.2■□□□□ 0.34
CSDC2Q9Y534 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSDC2Q9Y534 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSDC2Q9Y534 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CSDC2Q9Y534 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSDC2Q9Y534 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.19■□□□□ 0.34
CSDC2Q9Y534 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.19■□□□□ 0.34
CSDC2Q9Y534 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSDC2Q9Y534 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.18■□□□□ 0.34
CSDC2Q9Y534 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.18■□□□□ 0.34
CSDC2Q9Y534 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms