Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC34.5■■■■□ 3.11
ABCA3Q99758 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC34.5■■■■□ 3.11
ABCA3Q99758 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
ABCA3Q99758 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.49■■■■□ 3.11
ABCA3Q99758 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
ABCA3Q99758 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
ABCA3Q99758 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
ABCA3Q99758 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
ABCA3Q99758 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC34.48■■■■□ 3.11
ABCA3Q99758 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC34.47■■■■□ 3.11
ABCA3Q99758 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC34.47■■■■□ 3.11
ABCA3Q99758 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
ABCA3Q99758 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC34.47■■■■□ 3.11
ABCA3Q99758 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC34.47■■■■□ 3.11
ABCA3Q99758 REST-210ENST00000638187 1334 ntTSL 5 BASIC34.46■■■■□ 3.11
ABCA3Q99758 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ABCA3Q99758 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ABCA3Q99758 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
ABCA3Q99758 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
ABCA3Q99758 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC34.45■■■■□ 3.11
ABCA3Q99758 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
ABCA3Q99758 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC34.44■■■■□ 3.1
ABCA3Q99758 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC34.44■■■■□ 3.1
ABCA3Q99758 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCA3Q99758 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC34.44■■■■□ 3.1
ABCA3Q99758 DUX4L9-201ENST00000449051 1259 ntBASIC34.44■■■■□ 3.1
ABCA3Q99758 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC34.43■■■■□ 3.1
ABCA3Q99758 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
ABCA3Q99758 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.42■■■■□ 3.1
ABCA3Q99758 AL592295.1-201ENST00000400984 884 ntBASIC34.42■■■■□ 3.1
ABCA3Q99758 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
ABCA3Q99758 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA3Q99758 AC009299.2-201ENST00000482477 511 ntBASIC34.41■■■■□ 3.1
ABCA3Q99758 AC133552.2-201ENST00000619106 1032 ntBASIC34.41■■■■□ 3.1
ABCA3Q99758 MEST-211ENST00000437945 1455 ntTSL 5 BASIC34.41■■■■□ 3.1
ABCA3Q99758 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC34.41■■■■□ 3.1
ABCA3Q99758 DUX4L18-201ENST00000553347 1267 ntBASIC34.41■■■■□ 3.1
ABCA3Q99758 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA3Q99758 AC025884.2-201ENST00000553429 711 ntBASIC34.39■■■■□ 3.1
ABCA3Q99758 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC34.39■■■■□ 3.1
ABCA3Q99758 AL135925.1-201ENST00000605920 1701 ntBASIC34.39■■■■□ 3.1
ABCA3Q99758 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA3Q99758 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA3Q99758 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA3Q99758 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC34.36■■■■□ 3.09
ABCA3Q99758 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA3Q99758 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA3Q99758 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC34.35■■■■□ 3.09
ABCA3Q99758 SPCS2P3-201ENST00000500401 656 ntBASIC34.35■■■■□ 3.09
ABCA3Q99758 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC34.35■■■■□ 3.09
ABCA3Q99758 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
ABCA3Q99758 BEX3-202ENST00000372634 753 ntTSL 2 BASIC34.33■■■■□ 3.09
ABCA3Q99758 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
ABCA3Q99758 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
ABCA3Q99758 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC34.32■■■■□ 3.08
ABCA3Q99758 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
ABCA3Q99758 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA3Q99758 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
ABCA3Q99758 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC34.31■■■■□ 3.08
ABCA3Q99758 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ABCA3Q99758 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ABCA3Q99758 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC34.28■■■■□ 3.08
ABCA3Q99758 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC34.28■■■■□ 3.08
ABCA3Q99758 RAP2CP1-202ENST00000605179 643 ntBASIC34.27■■■■□ 3.08
ABCA3Q99758 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC34.27■■■■□ 3.08
ABCA3Q99758 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
ABCA3Q99758 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC34.27■■■■□ 3.08
ABCA3Q99758 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC34.27■■■■□ 3.08
ABCA3Q99758 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.08
ABCA3Q99758 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC34.26■■■■□ 3.08
ABCA3Q99758 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
ABCA3Q99758 MTURN-203ENST00000409688 843 ntTSL 2 BASIC34.26■■■■□ 3.07
ABCA3Q99758 AC093536.1-201ENST00000569153 554 ntBASIC34.26■■■■□ 3.07
ABCA3Q99758 AC026202.3-201ENST00000600805 1127 ntBASIC34.26■■■■□ 3.07
ABCA3Q99758 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC34.26■■■■□ 3.07
ABCA3Q99758 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC34.26■■■■□ 3.07
ABCA3Q99758 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
ABCA3Q99758 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC34.24■■■■□ 3.07
ABCA3Q99758 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
ABCA3Q99758 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
ABCA3Q99758 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
ABCA3Q99758 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
ABCA3Q99758 KRT8P33-201ENST00000508125 1423 ntBASIC34.22■■■■□ 3.07
ABCA3Q99758 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
ABCA3Q99758 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC34.21■■■■□ 3.07
ABCA3Q99758 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC34.21■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms