Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NR1H4Q96RI1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NR1H4Q96RI1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NR1H4Q96RI1 DUSP8P4-201ENST00000399538 1761 ntBASIC23.65■■□□□ 1.38
NR1H4Q96RI1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NR1H4Q96RI1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NR1H4Q96RI1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NR1H4Q96RI1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NR1H4Q96RI1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NR1H4Q96RI1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.63■■□□□ 1.37
NR1H4Q96RI1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NR1H4Q96RI1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NR1H4Q96RI1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 AP004833.2-201ENST00000532228 1454 ntBASIC23.62■■□□□ 1.37
NR1H4Q96RI1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 AC012676.1-201ENST00000574705 1949 ntBASIC23.62■■□□□ 1.37
NR1H4Q96RI1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NR1H4Q96RI1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
NR1H4Q96RI1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NR1H4Q96RI1 AC133561.1-201ENST00000568600 2415 ntBASIC23.61■■□□□ 1.37
NR1H4Q96RI1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NR1H4Q96RI1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NR1H4Q96RI1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NR1H4Q96RI1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
NR1H4Q96RI1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NR1H4Q96RI1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NR1H4Q96RI1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NR1H4Q96RI1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NR1H4Q96RI1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NR1H4Q96RI1 LINC00543-201ENST00000567234 1845 ntBASIC23.54■■□□□ 1.36
NR1H4Q96RI1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NR1H4Q96RI1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.53■■□□□ 1.36
NR1H4Q96RI1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.53■■□□□ 1.36
NR1H4Q96RI1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.52■■□□□ 1.36
NR1H4Q96RI1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NR1H4Q96RI1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.51■■□□□ 1.35
NR1H4Q96RI1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
NR1H4Q96RI1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NR1H4Q96RI1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NR1H4Q96RI1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NR1H4Q96RI1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NR1H4Q96RI1 ERN1-208ENST00000606895 2068 ntBASIC23.48■■□□□ 1.35
NR1H4Q96RI1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NR1H4Q96RI1 AC092803.2-201ENST00000564287 1899 ntBASIC23.47■■□□□ 1.35
NR1H4Q96RI1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NR1H4Q96RI1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NR1H4Q96RI1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms