Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF439Q8NDP4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF439Q8NDP4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF439Q8NDP4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF439Q8NDP4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF439Q8NDP4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF439Q8NDP4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF439Q8NDP4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF439Q8NDP4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF439Q8NDP4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF439Q8NDP4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF439Q8NDP4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF439Q8NDP4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF439Q8NDP4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF439Q8NDP4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF439Q8NDP4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF439Q8NDP4 AC110285.7-201ENST00000624417 1536 ntBASIC20.65■□□□□ 0.9
ZNF439Q8NDP4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF439Q8NDP4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ZNF439Q8NDP4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZNF439Q8NDP4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF439Q8NDP4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
ZNF439Q8NDP4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
ZNF439Q8NDP4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF439Q8NDP4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF439Q8NDP4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZNF439Q8NDP4 AL121749.1-202ENST00000609313 2153 ntBASIC20.64■□□□□ 0.89
ZNF439Q8NDP4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZNF439Q8NDP4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF439Q8NDP4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF439Q8NDP4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF439Q8NDP4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF439Q8NDP4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF439Q8NDP4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF439Q8NDP4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF439Q8NDP4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF439Q8NDP4 LINC01971-201ENST00000617888 1048 ntBASIC20.6■□□□□ 0.89
ZNF439Q8NDP4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ZNF439Q8NDP4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF439Q8NDP4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZNF439Q8NDP4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZNF439Q8NDP4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF439Q8NDP4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF439Q8NDP4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ZNF439Q8NDP4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ZNF439Q8NDP4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ZNF439Q8NDP4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF439Q8NDP4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF439Q8NDP4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ZNF439Q8NDP4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF439Q8NDP4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.57■□□□□ 0.88
ZNF439Q8NDP4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF439Q8NDP4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.57■□□□□ 0.88
ZNF439Q8NDP4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.57■□□□□ 0.88
ZNF439Q8NDP4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF439Q8NDP4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF439Q8NDP4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF439Q8NDP4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF439Q8NDP4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF439Q8NDP4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.56■□□□□ 0.88
ZNF439Q8NDP4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF439Q8NDP4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF439Q8NDP4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF439Q8NDP4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF439Q8NDP4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF439Q8NDP4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF439Q8NDP4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF439Q8NDP4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZNF439Q8NDP4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZNF439Q8NDP4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF439Q8NDP4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF439Q8NDP4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF439Q8NDP4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF439Q8NDP4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF439Q8NDP4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF439Q8NDP4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ZNF439Q8NDP4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms