Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF561Q8N587 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF561Q8N587 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF561Q8N587 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF561Q8N587 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF561Q8N587 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF561Q8N587 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNF561Q8N587 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF561Q8N587 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF561Q8N587 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF561Q8N587 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ZNF561Q8N587 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF561Q8N587 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF561Q8N587 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF561Q8N587 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ZNF561Q8N587 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF561Q8N587 AC110285.7-201ENST00000624417 1536 ntBASIC21.18■□□□□ 0.98
ZNF561Q8N587 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.18■□□□□ 0.98
ZNF561Q8N587 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF561Q8N587 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.17■□□□□ 0.98
ZNF561Q8N587 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF561Q8N587 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF561Q8N587 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF561Q8N587 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ZNF561Q8N587 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.16■□□□□ 0.98
ZNF561Q8N587 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF561Q8N587 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ZNF561Q8N587 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF561Q8N587 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.16■□□□□ 0.98
ZNF561Q8N587 DUX4L11-201ENST00000611504 1267 ntBASIC21.16■□□□□ 0.98
ZNF561Q8N587 DUX4L12-201ENST00000614593 1267 ntBASIC21.16■□□□□ 0.98
ZNF561Q8N587 DUX4L14-201ENST00000621227 1267 ntBASIC21.16■□□□□ 0.98
ZNF561Q8N587 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF561Q8N587 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.16■□□□□ 0.98
ZNF561Q8N587 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ZNF561Q8N587 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF561Q8N587 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF561Q8N587 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF561Q8N587 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF561Q8N587 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF561Q8N587 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF561Q8N587 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF561Q8N587 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L13-201ENST00000554103 1267 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L15-201ENST00000611059 1267 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L23-201ENST00000615195 1269 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L24-201ENST00000617576 1269 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L22-201ENST00000618238 1269 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L20-201ENST00000619712 1269 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L21-201ENST00000622058 1269 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L10-201ENST00000622460 1267 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 DUX4L25-201ENST00000624915 1269 ntBASIC21.14■□□□□ 0.97
ZNF561Q8N587 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF561Q8N587 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF561Q8N587 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF561Q8N587 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF561Q8N587 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ZNF561Q8N587 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
ZNF561Q8N587 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF561Q8N587 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF561Q8N587 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.11■□□□□ 0.97
ZNF561Q8N587 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF561Q8N587 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF561Q8N587 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF561Q8N587 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF561Q8N587 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.11■□□□□ 0.97
ZNF561Q8N587 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.11■□□□□ 0.97
ZNF561Q8N587 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF561Q8N587 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF561Q8N587 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF561Q8N587 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF561Q8N587 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF561Q8N587 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ZNF561Q8N587 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF561Q8N587 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF561Q8N587 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF561Q8N587 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF561Q8N587 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF561Q8N587 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF561Q8N587 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF561Q8N587 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF561Q8N587 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF561Q8N587 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ZNF561Q8N587 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ZNF561Q8N587 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF561Q8N587 BX255925.1-201ENST00000566954 1854 ntBASIC21.08■□□□□ 0.97
ZNF561Q8N587 AC018358.1-201ENST00000631079 1402 ntBASIC21.08■□□□□ 0.97
ZNF561Q8N587 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF561Q8N587 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF561Q8N587 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF561Q8N587 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF561Q8N587 LINC01003-201ENST00000564834 1764 ntBASIC21.07■□□□□ 0.96
ZNF561Q8N587 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF561Q8N587 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF561Q8N587 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF561Q8N587 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF561Q8N587 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF561Q8N587 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF561Q8N587 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF561Q8N587 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms