Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDKN2DP55273 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDKN2DP55273 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDKN2DP55273 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDKN2DP55273 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CDKN2DP55273 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CDKN2DP55273 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDKN2DP55273 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CDKN2DP55273 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.9■■□□□ 1.58
CDKN2DP55273 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDKN2DP55273 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.9■■□□□ 1.58
CDKN2DP55273 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CDKN2DP55273 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.89■■□□□ 1.58
CDKN2DP55273 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.89■■□□□ 1.58
CDKN2DP55273 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.89■■□□□ 1.58
CDKN2DP55273 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDKN2DP55273 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CDKN2DP55273 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.88■■□□□ 1.57
CDKN2DP55273 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDKN2DP55273 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKN2DP55273 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKN2DP55273 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CDKN2DP55273 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKN2DP55273 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKN2DP55273 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.87■■□□□ 1.57
CDKN2DP55273 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDKN2DP55273 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDKN2DP55273 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDKN2DP55273 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDKN2DP55273 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDKN2DP55273 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.86■■□□□ 1.57
CDKN2DP55273 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.86■■□□□ 1.57
CDKN2DP55273 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDKN2DP55273 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
CDKN2DP55273 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDKN2DP55273 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.84■■□□□ 1.57
CDKN2DP55273 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.83■■□□□ 1.57
CDKN2DP55273 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.83■■□□□ 1.57
CDKN2DP55273 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.83■■□□□ 1.57
CDKN2DP55273 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
CDKN2DP55273 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CDKN2DP55273 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CDKN2DP55273 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDKN2DP55273 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CDKN2DP55273 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDKN2DP55273 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
CDKN2DP55273 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CDKN2DP55273 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDKN2DP55273 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.8■■□□□ 1.56
CDKN2DP55273 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDKN2DP55273 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDKN2DP55273 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDKN2DP55273 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDKN2DP55273 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.8■■□□□ 1.56
CDKN2DP55273 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.8■■□□□ 1.56
CDKN2DP55273 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDKN2DP55273 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDKN2DP55273 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.78■■□□□ 1.56
CDKN2DP55273 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.78■■□□□ 1.56
CDKN2DP55273 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.78■■□□□ 1.56
CDKN2DP55273 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.78■■□□□ 1.56
CDKN2DP55273 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.78■■□□□ 1.56
CDKN2DP55273 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDKN2DP55273 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDKN2DP55273 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CDKN2DP55273 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDKN2DP55273 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
CDKN2DP55273 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDKN2DP55273 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CDKN2DP55273 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CDKN2DP55273 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDKN2DP55273 LINC01971-201ENST00000617888 1048 ntBASIC24.76■■□□□ 1.55
CDKN2DP55273 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDKN2DP55273 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDKN2DP55273 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.76■■□□□ 1.55
CDKN2DP55273 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CDKN2DP55273 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDKN2DP55273 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CDKN2DP55273 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDKN2DP55273 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDKN2DP55273 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.75■■□□□ 1.55
CDKN2DP55273 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
CDKN2DP55273 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.74■■□□□ 1.55
CDKN2DP55273 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.74■■□□□ 1.55
CDKN2DP55273 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CDKN2DP55273 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.73■■□□□ 1.55
CDKN2DP55273 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDKN2DP55273 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.73■■□□□ 1.55
CDKN2DP55273 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.72■■□□□ 1.55
CDKN2DP55273 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.72■■□□□ 1.55
CDKN2DP55273 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.72■■□□□ 1.55
CDKN2DP55273 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDKN2DP55273 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDKN2DP55273 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDKN2DP55273 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.7■■□□□ 1.54
CDKN2DP55273 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDKN2DP55273 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.69■■□□□ 1.54
CDKN2DP55273 AL449106.1-201ENST00000608517 1980 ntBASIC24.69■■□□□ 1.54
CDKN2DP55273 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.68■■□□□ 1.54
CDKN2DP55273 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms