Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDC34P49427 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDC34P49427 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC34P49427 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC34P49427 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC34P49427 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDC34P49427 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.71■□□□□ 0.75
CDC34P49427 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDC34P49427 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC34P49427 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.71■□□□□ 0.75
CDC34P49427 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC34P49427 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC34P49427 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
CDC34P49427 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.69■□□□□ 0.74
CDC34P49427 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC34P49427 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC34P49427 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDC34P49427 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC34P49427 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC34P49427 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC34P49427 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC34P49427 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC34P49427 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDC34P49427 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC34P49427 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDC34P49427 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC34P49427 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC34P49427 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDC34P49427 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC34P49427 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC34P49427 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC34P49427 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC34P49427 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC34P49427 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC34P49427 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC34P49427 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC34P49427 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.66■□□□□ 0.74
CDC34P49427 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC34P49427 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC34P49427 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.65■□□□□ 0.74
CDC34P49427 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC34P49427 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC34P49427 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.65■□□□□ 0.74
CDC34P49427 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC34P49427 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.65■□□□□ 0.74
CDC34P49427 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.64■□□□□ 0.74
CDC34P49427 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDC34P49427 AC018358.1-201ENST00000631079 1402 ntBASIC19.64■□□□□ 0.73
CDC34P49427 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDC34P49427 AC093323.1-202ENST00000635031 2045 ntBASIC19.64■□□□□ 0.73
CDC34P49427 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.64■□□□□ 0.73
CDC34P49427 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC34P49427 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC34P49427 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC34P49427 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC34P49427 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDC34P49427 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC34P49427 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC34P49427 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC34P49427 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC34P49427 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
CDC34P49427 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDC34P49427 DUSP8P4-201ENST00000399538 1761 ntBASIC19.62■□□□□ 0.73
CDC34P49427 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDC34P49427 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDC34P49427 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC34P49427 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC34P49427 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC34P49427 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC34P49427 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC34P49427 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDC34P49427 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC34P49427 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC34P49427 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC34P49427 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC34P49427 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.6■□□□□ 0.73
CDC34P49427 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC34P49427 AC092803.2-201ENST00000564287 1899 ntBASIC19.59■□□□□ 0.73
CDC34P49427 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC34P49427 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC34P49427 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC34P49427 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC34P49427 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.59■□□□□ 0.73
CDC34P49427 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.59■□□□□ 0.73
CDC34P49427 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC34P49427 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
CDC34P49427 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC34P49427 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC34P49427 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.58■□□□□ 0.72
CDC34P49427 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC34P49427 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CDC34P49427 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms