Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACKR3P25106 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.76■■□□□ 1.07
ACKR3P25106 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ACKR3P25106 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ACKR3P25106 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACKR3P25106 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACKR3P25106 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ACKR3P25106 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACKR3P25106 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACKR3P25106 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACKR3P25106 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACKR3P25106 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACKR3P25106 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACKR3P25106 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACKR3P25106 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACKR3P25106 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACKR3P25106 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACKR3P25106 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACKR3P25106 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACKR3P25106 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACKR3P25106 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACKR3P25106 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.73■■□□□ 1.07
ACKR3P25106 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACKR3P25106 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACKR3P25106 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.72■■□□□ 1.07
ACKR3P25106 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.72■■□□□ 1.07
ACKR3P25106 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ACKR3P25106 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACKR3P25106 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ACKR3P25106 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACKR3P25106 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACKR3P25106 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACKR3P25106 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACKR3P25106 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACKR3P25106 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACKR3P25106 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ACKR3P25106 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACKR3P25106 AC110285.7-201ENST00000624417 1536 ntBASIC21.7■■□□□ 1.06
ACKR3P25106 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACKR3P25106 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.68■■□□□ 1.06
ACKR3P25106 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.68■■□□□ 1.06
ACKR3P25106 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ACKR3P25106 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ACKR3P25106 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACKR3P25106 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACKR3P25106 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACKR3P25106 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACKR3P25106 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.67■■□□□ 1.06
ACKR3P25106 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ACKR3P25106 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ACKR3P25106 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACKR3P25106 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACKR3P25106 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ACKR3P25106 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.66■■□□□ 1.06
ACKR3P25106 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.66■■□□□ 1.06
ACKR3P25106 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ACKR3P25106 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACKR3P25106 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.65■■□□□ 1.06
ACKR3P25106 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ACKR3P25106 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ACKR3P25106 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ACKR3P25106 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACKR3P25106 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.65■■□□□ 1.06
ACKR3P25106 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ACKR3P25106 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ACKR3P25106 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ACKR3P25106 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.64■■□□□ 1.05
ACKR3P25106 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.63■■□□□ 1.05
ACKR3P25106 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ACKR3P25106 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.63■■□□□ 1.05
ACKR3P25106 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACKR3P25106 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
ACKR3P25106 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
ACKR3P25106 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ACKR3P25106 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACKR3P25106 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.63■■□□□ 1.05
ACKR3P25106 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ACKR3P25106 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ACKR3P25106 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ACKR3P25106 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.62■■□□□ 1.05
ACKR3P25106 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACKR3P25106 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACKR3P25106 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ACKR3P25106 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ACKR3P25106 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
ACKR3P25106 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ACKR3P25106 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.6■■□□□ 1.05
ACKR3P25106 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ACKR3P25106 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ACKR3P25106 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ACKR3P25106 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ACKR3P25106 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ACKR3P25106 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ACKR3P25106 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.58■■□□□ 1.05
ACKR3P25106 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.58■■□□□ 1.05
ACKR3P25106 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ACKR3P25106 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.58■■□□□ 1.04
ACKR3P25106 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACKR3P25106 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACKR3P25106 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms