Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YNL134CYNL134C 1131 nt8.58□□□□□ -1.04
TY1A-PR2P0CX60 MFA2YNL145W 117 nt8.58□□□□□ -1.04
TY1A-PR2P0CX60 YNR025CYNR025C 360 nt8.58□□□□□ -1.04
TY1A-PR2P0CX60 ARA1YBR149W 1035 nt8.58□□□□□ -1.04
TY1A-PR2P0CX60 DPB2YPR175W 2070 nt8.58□□□□□ -1.04
TY1A-PR2P0CX60 TPO4YOR273C 1980 nt8.57□□□□□ -1.04
TY1A-PR2P0CX60 YGR201CYGR201C 678 nt8.57□□□□□ -1.04
TY1A-PR2P0CX60 RHO3YIL118W 696 nt8.57□□□□□ -1.04
TY1A-PR2P0CX60 PRE7YBL041W 726 nt8.57□□□□□ -1.04
TY1A-PR2P0CX60 GPI2YPL076W 843 nt8.57□□□□□ -1.04
TY1A-PR2P0CX60 DUO1YGL061C 744 nt8.56□□□□□ -1.04
TY1A-PR2P0CX60 MPM1YJL066C 759 nt8.56□□□□□ -1.04
TY1A-PR2P0CX60 JNM1YMR294W 1122 nt8.56□□□□□ -1.04
TY1A-PR2P0CX60 YOL166CYOL166C 339 nt8.56□□□□□ -1.04
TY1A-PR2P0CX60 YPR011CYPR011C 981 nt8.56□□□□□ -1.04
TY1A-PR2P0CX60 PTM1YKL039W 1572 nt8.56□□□□□ -1.04
TY1A-PR2P0CX60 GCN5YGR252W 1320 nt8.55□□□□□ -1.04
TY1A-PR2P0CX60 HTB1YDR224C 396 nt8.55□□□□□ -1.04
TY1A-PR2P0CX60 MMM1YLL006W 1281 nt8.55□□□□□ -1.04
TY1A-PR2P0CX60 YAL066WYAL066W 309 nt8.55□□□□□ -1.04
TY1A-PR2P0CX60 ORM2YLR350W 651 nt8.55□□□□□ -1.04
TY1A-PR2P0CX60 YOR325WYOR325W 474 nt8.55□□□□□ -1.04
TY1A-PR2P0CX60 YDR034W-BYDR034W-B 156 nt8.54□□□□□ -1.04
TY1A-PR2P0CX60 ERG25YGR060W 930 nt8.54□□□□□ -1.04
TY1A-PR2P0CX60 YIL086CYIL086C 309 nt8.54□□□□□ -1.04
TY1A-PR2P0CX60 PRM5YIL117C 957 nt8.54□□□□□ -1.04
TY1A-PR2P0CX60 ROT1YMR200W 771 nt8.54□□□□□ -1.04
TY1A-PR2P0CX60 RFM1YOR279C 933 nt8.54□□□□□ -1.04
TY1A-PR2P0CX60 YLR108CYLR108C 1458 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 ALG3YBL082C 1377 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 YDR124WYDR124W 975 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 YGR016WYGR016W 573 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 YLL059CYLL059C 507 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 PSY3YLR376C 729 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 RRT1YBL048W 312 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 UBP8YMR223W 1416 nt8.53□□□□□ -1.04
TY1A-PR2P0CX60 PCL2YDL127W 927 nt8.52□□□□□ -1.05
TY1A-PR2P0CX60 VPS60YDR486C 690 nt8.52□□□□□ -1.05
TY1A-PR2P0CX60 YGL177WYGL177W 348 nt8.52□□□□□ -1.05
TY1A-PR2P0CX60 SEC65YML105C 822 nt8.52□□□□□ -1.05
TY1A-PR2P0CX60 EFM2YBR271W 1260 nt8.52□□□□□ -1.05
TY1A-PR2P0CX60 RAV2YDR202C 1056 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 STE2YFL026W 1296 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 YIL168WYIL168W 384 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 URA4YLR420W 1095 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 YPL136WYPL136W 369 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 PLB1YMR008C 1995 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 ALD4YOR374W 1560 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 UGA4YDL210W 1716 nt8.51□□□□□ -1.05
TY1A-PR2P0CX60 HEM3YDL205C 984 nt8.5□□□□□ -1.05
TY1A-PR2P0CX60 OCH1YGL038C 1443 nt8.5□□□□□ -1.05
TY1A-PR2P0CX60 PPE1YHR075C 1203 nt8.5□□□□□ -1.05
TY1A-PR2P0CX60 YHR112CYHR112C 1137 nt8.5□□□□□ -1.05
TY1A-PR2P0CX60 AIM22YJL046W 1230 nt8.5□□□□□ -1.05
TY1A-PR2P0CX60 YLR194CYLR194C 765 nt8.5□□□□□ -1.05
TY1A-PR2P0CX60 PRP40YKL012W 1752 nt8.5□□□□□ -1.05
TY1A-PR2P0CX60 YGL214WYGL214W 486 nt8.49□□□□□ -1.05
TY1A-PR2P0CX60 MRPL6YHR147C 645 nt8.49□□□□□ -1.05
TY1A-PR2P0CX60 YCR100CYCR100C 951 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 GRX6YDL010W 696 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 PEX19YDL065C 1029 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 YDR401WYDR401W 564 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 SPO11YHL022C 1197 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 YJL032WYJL032W 315 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 ERP2YAL007C 648 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 IME1YJR094C 1083 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 SAL1YNL083W 1485 nt8.48□□□□□ -1.05
TY1A-PR2P0CX60 YDL016CYDL016C 303 nt8.47□□□□□ -1.05
TY1A-PR2P0CX60 GTO1YGR154C 1071 nt8.47□□□□□ -1.05
TY1A-PR2P0CX60 POT1YIL160C 1254 nt8.47□□□□□ -1.05
TY1A-PR2P0CX60 YIR043CYIR043C 693 nt8.47□□□□□ -1.05
TY1A-PR2P0CX60 TRM10YOL093W 882 nt8.47□□□□□ -1.05
TY1A-PR2P0CX60 YPL162CYPL162C 822 nt8.47□□□□□ -1.05
TY1A-PR2P0CX60 YPR147CYPR147C 915 nt8.47□□□□□ -1.05
TY1A-PR2P0CX60 MRPL13YKR006C 795 nt8.46□□□□□ -1.06
TY1A-PR2P0CX60 YNL194CYNL194C 906 nt8.46□□□□□ -1.06
TY1A-PR2P0CX60 YOR097CYOR097C 528 nt8.46□□□□□ -1.06
TY1A-PR2P0CX60 SGA1YIL099W 1650 nt8.46□□□□□ -1.06
TY1A-PR2P0CX60 YHR177WYHR177W 1362 nt8.46□□□□□ -1.06
TY1A-PR2P0CX60 MEK1YOR351C 1494 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 YDL026WYDL026W 312 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 YKR040CYKR040C 504 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 DOM34YNL001W 1161 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 SFT2YBL102W 648 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 YOR032W-AYOR032W-A 201 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 YOR364WYOR364W 369 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 CUP9YPL177C 921 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 RSA1YPL193W 1146 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 AVT6YER119C 1347 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 NFI1YOR156C 2181 nt8.45□□□□□ -1.06
TY1A-PR2P0CX60 GLE1YDL207W 1617 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 IST3YIR005W 447 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 ERV46YAL042W 1248 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 ECM8YBR076W 1065 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 LDH1YBR204C 1128 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 SNU71YGR013W 1863 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 LDB17YDL146W 1476 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 CCT4YDL143W 1587 nt8.44□□□□□ -1.06
TY1A-PR2P0CX60 SRG1SRG1 551 nt8.43□□□□□ -1.06
TY1A-PR2P0CX60 YJR084WYJR084W 1272 nt8.43□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 41.2 ms