Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL592293.1-201ENST00000502889 1188 ntBASIC27.1■■□□□ 1.93
RB1P06400 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RB1P06400 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RB1P06400 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RB1P06400 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.09■■□□□ 1.93
RB1P06400 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RB1P06400 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RB1P06400 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RB1P06400 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
RB1P06400 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
RB1P06400 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.08■■□□□ 1.93
RB1P06400 AC009831.1-201ENST00000580420 1582 ntBASIC27.08■■□□□ 1.93
RB1P06400 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RB1P06400 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RB1P06400 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RB1P06400 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.06■■□□□ 1.92
RB1P06400 DUX4L18-201ENST00000553347 1267 ntBASIC27.06■■□□□ 1.92
RB1P06400 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.05■■□□□ 1.92
RB1P06400 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RB1P06400 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RB1P06400 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RB1P06400 SMPD5-203ENST00000639008 1464 ntBASIC27.05■■□□□ 1.92
RB1P06400 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.05■■□□□ 1.92
RB1P06400 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RB1P06400 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.04■■□□□ 1.92
RB1P06400 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RB1P06400 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
RB1P06400 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RB1P06400 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RB1P06400 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.03■■□□□ 1.92
RB1P06400 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RB1P06400 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
RB1P06400 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
RB1P06400 AL035685.1-201ENST00000636663 812 ntBASIC27.02■■□□□ 1.92
RB1P06400 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.02■■□□□ 1.92
RB1P06400 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.01■■□□□ 1.91
RB1P06400 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RB1P06400 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RB1P06400 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
RB1P06400 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27■■□□□ 1.91
RB1P06400 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
RB1P06400 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.99■■□□□ 1.91
RB1P06400 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
RB1P06400 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.99■■□□□ 1.91
RB1P06400 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RB1P06400 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RB1P06400 AC026202.3-201ENST00000600805 1127 ntBASIC26.98■■□□□ 1.91
RB1P06400 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RB1P06400 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.97■■□□□ 1.91
RB1P06400 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
RB1P06400 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.96■■□□□ 1.91
RB1P06400 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RB1P06400 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
RB1P06400 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.96■■□□□ 1.91
RB1P06400 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RB1P06400 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
RB1P06400 AL451085.2-201ENST00000605085 799 ntBASIC26.95■■□□□ 1.9
RB1P06400 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RB1P06400 AP004833.2-201ENST00000532228 1454 ntBASIC26.94■■□□□ 1.9
RB1P06400 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RB1P06400 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RB1P06400 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.94■■□□□ 1.9
RB1P06400 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RB1P06400 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.93■■□□□ 1.9
RB1P06400 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.93■■□□□ 1.9
RB1P06400 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RB1P06400 AL359258.2-201ENST00000564063 1566 ntBASIC26.92■■□□□ 1.9
RB1P06400 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RB1P06400 AC025884.2-201ENST00000553429 711 ntBASIC26.92■■□□□ 1.9
RB1P06400 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.92■■□□□ 1.9
RB1P06400 AC074183.2-201ENST00000623112 922 ntBASIC26.92■■□□□ 1.9
RB1P06400 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RB1P06400 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.91■■□□□ 1.9
RB1P06400 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RB1P06400 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RB1P06400 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RB1P06400 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.9■■□□□ 1.9
RB1P06400 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.9■■□□□ 1.9
RB1P06400 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
RB1P06400 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RB1P06400 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RB1P06400 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.9■■□□□ 1.9
RB1P06400 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
RB1P06400 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RB1P06400 RP9P-202ENST00000450133 1212 ntBASIC26.89■■□□□ 1.9
RB1P06400 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.89
RB1P06400 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
RB1P06400 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.88■■□□□ 1.89
RB1P06400 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
RB1P06400 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RB1P06400 DUX4L9-201ENST00000449051 1259 ntBASIC26.87■■□□□ 1.89
RB1P06400 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.87■■□□□ 1.89
RB1P06400 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
RB1P06400 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.87■■□□□ 1.89
RB1P06400 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RB1P06400 BHLHE23-202ENST00000612929 1109 ntBASIC26.86■■□□□ 1.89
RB1P06400 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms