Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.41■■□□□ 1.18
HLA-DQA2P01906 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HLA-DQA2P01906 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HLA-DQA2P01906 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HLA-DQA2P01906 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HLA-DQA2P01906 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HLA-DQA2P01906 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HLA-DQA2P01906 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HLA-DQA2P01906 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HLA-DQA2P01906 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.39■■□□□ 1.17
HLA-DQA2P01906 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.39■■□□□ 1.17
HLA-DQA2P01906 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.39■■□□□ 1.17
HLA-DQA2P01906 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HLA-DQA2P01906 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HLA-DQA2P01906 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HLA-DQA2P01906 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HLA-DQA2P01906 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.38■■□□□ 1.17
HLA-DQA2P01906 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HLA-DQA2P01906 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.37■■□□□ 1.17
HLA-DQA2P01906 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HLA-DQA2P01906 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.37■■□□□ 1.17
HLA-DQA2P01906 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HLA-DQA2P01906 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HLA-DQA2P01906 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.36■■□□□ 1.17
HLA-DQA2P01906 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
HLA-DQA2P01906 AC018358.1-201ENST00000631079 1402 ntBASIC22.36■■□□□ 1.17
HLA-DQA2P01906 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HLA-DQA2P01906 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
HLA-DQA2P01906 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.35■■□□□ 1.17
HLA-DQA2P01906 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HLA-DQA2P01906 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
HLA-DQA2P01906 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HLA-DQA2P01906 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
HLA-DQA2P01906 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HLA-DQA2P01906 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HLA-DQA2P01906 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.34■■□□□ 1.17
HLA-DQA2P01906 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
HLA-DQA2P01906 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HLA-DQA2P01906 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HLA-DQA2P01906 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.33■■□□□ 1.17
HLA-DQA2P01906 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
HLA-DQA2P01906 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.32■■□□□ 1.16
HLA-DQA2P01906 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DQA2P01906 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DQA2P01906 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DQA2P01906 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DQA2P01906 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HLA-DQA2P01906 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DQA2P01906 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.31■■□□□ 1.16
HLA-DQA2P01906 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HLA-DQA2P01906 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DQA2P01906 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HLA-DQA2P01906 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.3■■□□□ 1.16
HLA-DQA2P01906 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DQA2P01906 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
HLA-DQA2P01906 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.29■■□□□ 1.16
HLA-DQA2P01906 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DQA2P01906 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HLA-DQA2P01906 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DQA2P01906 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.29■■□□□ 1.16
HLA-DQA2P01906 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.28■■□□□ 1.16
HLA-DQA2P01906 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DQA2P01906 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DQA2P01906 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DQA2P01906 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
HLA-DQA2P01906 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DQA2P01906 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
HLA-DQA2P01906 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
HLA-DQA2P01906 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HLA-DQA2P01906 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DQA2P01906 DUX4L29-201ENST00000425409 679 ntBASIC22.26■■□□□ 1.15
HLA-DQA2P01906 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DQA2P01906 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HLA-DQA2P01906 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA2P01906 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DQA2P01906 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.24■■□□□ 1.15
HLA-DQA2P01906 AC021231.2-201ENST00000594613 730 ntBASIC22.24■■□□□ 1.15
HLA-DQA2P01906 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DQA2P01906 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DQA2P01906 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
HLA-DQA2P01906 AC110285.7-201ENST00000624417 1536 ntBASIC22.23■■□□□ 1.15
HLA-DQA2P01906 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.23■■□□□ 1.15
HLA-DQA2P01906 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DQA2P01906 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DQA2P01906 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DQA2P01906 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 478.7 ms