Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO2P00403 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.06■□□□□ 0.8
MT-CO2P00403 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.06■□□□□ 0.8
MT-CO2P00403 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO2P00403 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO2P00403 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO2P00403 DUX4L28-201ENST00000623687 678 ntBASIC20.05■□□□□ 0.8
MT-CO2P00403 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO2P00403 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO2P00403 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO2P00403 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO2P00403 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO2P00403 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO2P00403 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO2P00403 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-CO2P00403 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
MT-CO2P00403 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.03■□□□□ 0.8
MT-CO2P00403 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-CO2P00403 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO2P00403 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MT-CO2P00403 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MT-CO2P00403 MIR3665-201ENST00000578708 105 ntBASIC20.02■□□□□ 0.8
MT-CO2P00403 MIR6090-201ENST00000622481 60 ntBASIC20.02■□□□□ 0.8
MT-CO2P00403 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-CO2P00403 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
MT-CO2P00403 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO2P00403 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO2P00403 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO2P00403 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-CO2P00403 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MT-CO2P00403 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20■□□□□ 0.79
MT-CO2P00403 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MT-CO2P00403 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-CO2P00403 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-CO2P00403 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20■□□□□ 0.79
MT-CO2P00403 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20■□□□□ 0.79
MT-CO2P00403 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-CO2P00403 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.99■□□□□ 0.79
MT-CO2P00403 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MT-CO2P00403 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
MT-CO2P00403 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.98■□□□□ 0.79
MT-CO2P00403 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-CO2P00403 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.98■□□□□ 0.79
MT-CO2P00403 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-CO2P00403 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.98■□□□□ 0.79
MT-CO2P00403 AC135983.2-203ENST00000454486 1613 ntBASIC19.98■□□□□ 0.79
MT-CO2P00403 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.98■□□□□ 0.79
MT-CO2P00403 LINC01003-201ENST00000564834 1764 ntBASIC19.98■□□□□ 0.79
MT-CO2P00403 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MT-CO2P00403 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-CO2P00403 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
MT-CO2P00403 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MT-CO2P00403 AP006261.1-201ENST00000584783 668 ntBASIC19.97■□□□□ 0.79
MT-CO2P00403 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-CO2P00403 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
MT-CO2P00403 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MT-CO2P00403 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-CO2P00403 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-CO2P00403 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-CO2P00403 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.96■□□□□ 0.79
MT-CO2P00403 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.96■□□□□ 0.79
MT-CO2P00403 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-CO2P00403 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MT-CO2P00403 AP002414.2-202ENST00000590929 1450 ntBASIC19.96■□□□□ 0.79
MT-CO2P00403 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MT-CO2P00403 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.95■□□□□ 0.78
MT-CO2P00403 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MT-CO2P00403 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-CO2P00403 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MT-CO2P00403 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.95■□□□□ 0.78
MT-CO2P00403 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-CO2P00403 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.94■□□□□ 0.78
MT-CO2P00403 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MT-CO2P00403 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MT-CO2P00403 WHAMMP2-203ENST00000563942 1603 ntBASIC19.94■□□□□ 0.78
MT-CO2P00403 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MT-CO2P00403 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.93■□□□□ 0.78
MT-CO2P00403 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MT-CO2P00403 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-CO2P00403 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MT-CO2P00403 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MT-CO2P00403 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MT-CO2P00403 LINC00273-201ENST00000539813 1452 ntBASIC19.92■□□□□ 0.78
MT-CO2P00403 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-CO2P00403 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-CO2P00403 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-CO2P00403 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-CO2P00403 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
MT-CO2P00403 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.91■□□□□ 0.78
MT-CO2P00403 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MT-CO2P00403 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO2P00403 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO2P00403 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO2P00403 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-CO2P00403 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.9■□□□□ 0.78
MT-CO2P00403 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MT-CO2P00403 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO2P00403 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO2P00403 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO2P00403 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms