Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.56■□□□□ 0.72
TOMM40O96008 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOMM40O96008 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TOMM40O96008 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TOMM40O96008 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOMM40O96008 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.55■□□□□ 0.72
TOMM40O96008 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOMM40O96008 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOMM40O96008 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TOMM40O96008 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOMM40O96008 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOMM40O96008 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOMM40O96008 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.54■□□□□ 0.72
TOMM40O96008 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TOMM40O96008 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TOMM40O96008 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TOMM40O96008 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.53■□□□□ 0.72
TOMM40O96008 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.53■□□□□ 0.72
TOMM40O96008 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.53■□□□□ 0.72
TOMM40O96008 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TOMM40O96008 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOMM40O96008 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.52■□□□□ 0.72
TOMM40O96008 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOMM40O96008 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.52■□□□□ 0.72
TOMM40O96008 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TOMM40O96008 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.52■□□□□ 0.72
TOMM40O96008 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TOMM40O96008 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.51■□□□□ 0.71
TOMM40O96008 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOMM40O96008 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOMM40O96008 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOMM40O96008 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TOMM40O96008 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.51■□□□□ 0.71
TOMM40O96008 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TOMM40O96008 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.51■□□□□ 0.71
TOMM40O96008 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.5■□□□□ 0.71
TOMM40O96008 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOMM40O96008 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.5■□□□□ 0.71
TOMM40O96008 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.5■□□□□ 0.71
TOMM40O96008 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TOMM40O96008 AC087741.3-201ENST00000624270 1347 ntBASIC19.5■□□□□ 0.71
TOMM40O96008 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOMM40O96008 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TOMM40O96008 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOMM40O96008 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TOMM40O96008 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TOMM40O96008 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.48■□□□□ 0.71
TOMM40O96008 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOMM40O96008 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TOMM40O96008 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.47■□□□□ 0.71
TOMM40O96008 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOMM40O96008 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOMM40O96008 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.47■□□□□ 0.71
TOMM40O96008 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOMM40O96008 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TOMM40O96008 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOMM40O96008 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOMM40O96008 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOMM40O96008 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOMM40O96008 AC044849.2-201ENST00000606596 710 ntBASIC19.46■□□□□ 0.71
TOMM40O96008 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TOMM40O96008 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOMM40O96008 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TOMM40O96008 AL162393.1-201ENST00000437852 946 ntBASIC19.45■□□□□ 0.7
TOMM40O96008 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.45■□□□□ 0.7
TOMM40O96008 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
TOMM40O96008 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TOMM40O96008 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TOMM40O96008 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TOMM40O96008 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TOMM40O96008 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TOMM40O96008 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TOMM40O96008 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOMM40O96008 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TOMM40O96008 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.43■□□□□ 0.7
TOMM40O96008 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOMM40O96008 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOMM40O96008 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOMM40O96008 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.42■□□□□ 0.7
TOMM40O96008 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOMM40O96008 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOMM40O96008 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.42■□□□□ 0.7
TOMM40O96008 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOMM40O96008 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.41■□□□□ 0.7
TOMM40O96008 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.41■□□□□ 0.7
TOMM40O96008 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.41■□□□□ 0.7
TOMM40O96008 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TOMM40O96008 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TOMM40O96008 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOMM40O96008 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOMM40O96008 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms