Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCAF4O95104 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCAF4O95104 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.32■□□□□ 0.84
SCAF4O95104 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.31■□□□□ 0.84
SCAF4O95104 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCAF4O95104 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SCAF4O95104 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.31■□□□□ 0.84
SCAF4O95104 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.3■□□□□ 0.84
SCAF4O95104 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCAF4O95104 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.3■□□□□ 0.84
SCAF4O95104 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCAF4O95104 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCAF4O95104 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCAF4O95104 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SCAF4O95104 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.29■□□□□ 0.84
SCAF4O95104 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAF4O95104 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SCAF4O95104 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAF4O95104 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAF4O95104 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCAF4O95104 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.29■□□□□ 0.84
SCAF4O95104 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAF4O95104 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAF4O95104 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.28■□□□□ 0.84
SCAF4O95104 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCAF4O95104 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCAF4O95104 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SCAF4O95104 AP002414.2-202ENST00000590929 1450 ntBASIC20.26■□□□□ 0.83
SCAF4O95104 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAF4O95104 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAF4O95104 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.26■□□□□ 0.83
SCAF4O95104 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.26■□□□□ 0.83
SCAF4O95104 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAF4O95104 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SCAF4O95104 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SCAF4O95104 AC127502.1-201ENST00000399971 1502 ntBASIC20.25■□□□□ 0.83
SCAF4O95104 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SCAF4O95104 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCAF4O95104 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SCAF4O95104 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCAF4O95104 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.24■□□□□ 0.83
SCAF4O95104 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCAF4O95104 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCAF4O95104 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCAF4O95104 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCAF4O95104 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCAF4O95104 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCAF4O95104 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCAF4O95104 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCAF4O95104 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.23■□□□□ 0.83
SCAF4O95104 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.22■□□□□ 0.83
SCAF4O95104 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCAF4O95104 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.22■□□□□ 0.83
SCAF4O95104 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SCAF4O95104 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCAF4O95104 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SCAF4O95104 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SCAF4O95104 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCAF4O95104 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.2■□□□□ 0.82
SCAF4O95104 MIR762-201ENST00000390236 83 ntBASIC20.2■□□□□ 0.82
SCAF4O95104 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAF4O95104 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCAF4O95104 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SCAF4O95104 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAF4O95104 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCAF4O95104 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAF4O95104 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAF4O95104 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAF4O95104 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCAF4O95104 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCAF4O95104 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCAF4O95104 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCAF4O95104 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCAF4O95104 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.18■□□□□ 0.82
SCAF4O95104 AC091060.1-201ENST00000623524 1766 ntBASIC20.18■□□□□ 0.82
SCAF4O95104 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.18■□□□□ 0.82
SCAF4O95104 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCAF4O95104 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.17■□□□□ 0.82
SCAF4O95104 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.17■□□□□ 0.82
SCAF4O95104 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCAF4O95104 AC020928.2-201ENST00000588717 2197 ntBASIC20.17■□□□□ 0.82
SCAF4O95104 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCAF4O95104 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCAF4O95104 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCAF4O95104 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCAF4O95104 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCAF4O95104 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.15■□□□□ 0.82
SCAF4O95104 AC018358.1-201ENST00000631079 1402 ntBASIC20.15■□□□□ 0.82
SCAF4O95104 AC145676.1-201ENST00000514988 2004 ntBASIC20.15■□□□□ 0.82
SCAF4O95104 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SCAF4O95104 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SCAF4O95104 AC093323.1-202ENST00000635031 2045 ntBASIC20.14■□□□□ 0.81
SCAF4O95104 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms