Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH7O60245 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDH7O60245 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH7O60245 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDH7O60245 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH7O60245 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDH7O60245 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH7O60245 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDH7O60245 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH7O60245 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PCDH7O60245 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PCDH7O60245 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH7O60245 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH7O60245 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDH7O60245 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH7O60245 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDH7O60245 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
PCDH7O60245 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH7O60245 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH7O60245 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH7O60245 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH7O60245 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH7O60245 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.96■■□□□ 1.43
PCDH7O60245 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.96■■□□□ 1.43
PCDH7O60245 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDH7O60245 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH7O60245 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH7O60245 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH7O60245 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDH7O60245 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDH7O60245 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PCDH7O60245 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PCDH7O60245 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH7O60245 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH7O60245 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH7O60245 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH7O60245 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.93■■□□□ 1.42
PCDH7O60245 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH7O60245 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH7O60245 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.93■■□□□ 1.42
PCDH7O60245 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDH7O60245 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH7O60245 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PCDH7O60245 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH7O60245 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH7O60245 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
PCDH7O60245 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH7O60245 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH7O60245 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
PCDH7O60245 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PCDH7O60245 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PCDH7O60245 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH7O60245 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDH7O60245 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDH7O60245 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDH7O60245 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDH7O60245 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
PCDH7O60245 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDH7O60245 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDH7O60245 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.89■■□□□ 1.41
PCDH7O60245 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PCDH7O60245 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDH7O60245 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDH7O60245 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH7O60245 LINC01971-201ENST00000617888 1048 ntBASIC23.88■■□□□ 1.41
PCDH7O60245 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH7O60245 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDH7O60245 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH7O60245 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDH7O60245 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH7O60245 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
PCDH7O60245 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDH7O60245 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDH7O60245 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDH7O60245 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH7O60245 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH7O60245 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PCDH7O60245 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDH7O60245 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH7O60245 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDH7O60245 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDH7O60245 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH7O60245 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDH7O60245 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDH7O60245 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH7O60245 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH7O60245 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PCDH7O60245 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH7O60245 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDH7O60245 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH7O60245 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH7O60245 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
PCDH7O60245 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH7O60245 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDH7O60245 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDH7O60245 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH7O60245 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDH7O60245 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH7O60245 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH7O60245 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms