Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRAV8-3A0A0A6YYJ7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 AL449106.1-201ENST00000608517 1980 ntBASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 MIR6090-201ENST00000622481 60 ntBASIC17.54■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-3A0A0A6YYJ7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 DUX4L29-201ENST00000425409 679 ntBASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 LINC01003-201ENST00000564834 1764 ntBASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-3A0A0A6YYJ7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-3A0A0A6YYJ7 AC127502.1-201ENST00000399971 1502 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms