RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeastyeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRN3YKL125W DRS1P32892 752 aaKnown RBP10.24□□□□□ -0.77
RRN3YKL125W MTC1P47018 478 aaKnown RBP9.72□□□□□ -0.85
RRN3YKL125W BFR2Q06631 534 aaKnown RBP9.08□□□□□ -0.96
RRN3YKL125W TFA1P36100 482 aa8.91□□□□□ -0.98
RRN3YKL125W AVT3P36062 692 aa8.6□□□□□ -1.03
RRN3YKL125W DIP2Q12220 943 aaPredicted RBP8.55□□□□□ -1.04
RRN3YKL125W FAP1P53971 965 aa8.32□□□□□ -1.08
RRN3YKL125W RQC2Q12532 1038 aaKnown RBP8.3□□□□□ -1.08
RRN3YKL125W RSE1Q04693 1361 aaKnown RBP7.94□□□□□ -1.14
RRN3YKL125W PRY3P47033 881 aa7.88□□□□□ -1.15
RRN3YKL125W NOP2P40991 618 aaKnown RBP7.81□□□□□ -1.16
RRN3YKL125W ISW2Q08773 1120 aa7.79□□□□□ -1.16
RRN3YKL125W RPG1P38249 964 aaKnown RBP7.66□□□□□ -1.18
RRN3YKL125W EBP2P36049 427 aaKnown RBP7.63□□□□□ -1.19
RRN3YKL125W RPL17AP05740 184 aaKnown RBP7.61□□□□□ -1.19
RRN3YKL125W RPL17BP46990 184 aaKnown RBP7.61□□□□□ -1.19
RRN3YKL125W URN1Q06525 465 aaKnown RBP7.61□□□□□ -1.19
RRN3YKL125W CAB3P36076 571 aa7.58□□□□□ -1.2
RRN3YKL125W NSR1P27476 414 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
RRN3YKL125W PRI1P10363 409 aa7.53□□□□□ -1.2
RRN3YKL125W YCK3P39962 524 aa7.51□□□□□ -1.21
RRN3YKL125W DMA1P38823 416 aa7.49□□□□□ -1.21
RRN3YKL125W SIS2P36024 562 aa7.47□□□□□ -1.21
RRN3YKL125W REB1P21538 810 aa7.46□□□□□ -1.22
RRN3YKL125W PTP3P40048 928 aa7.41□□□□□ -1.22
RRN3YKL125W RIM101P33400 625 aa7.41□□□□□ -1.22
RRN3YKL125W AAD16Q02895 342 aa7.41□□□□□ -1.22
RRN3YKL125W SPT21P35209 758 aa7.4□□□□□ -1.23
RRN3YKL125W HAA1Q12753 694 aaKnown RBP7.34□□□□□ -1.23
RRN3YKL125W YPR148CQ06523 435 aa7.32□□□□□ -1.24
RRN3YKL125W SSP1P38871 571 aa7.28□□□□□ -1.24
RRN3YKL125W TAF7Q05021 590 aa7.25□□□□□ -1.25
RRN3YKL125W SKI3P17883 1432 aaKnown RBP7.22□□□□□ -1.25
RRN3YKL125W YFR016CP43597 1233 aaKnown RBP7.19□□□□□ -1.26
RRN3YKL125W OXP1P28273 1286 aa7.18□□□□□ -1.26
RRN3YKL125W TSR3Q12094 313 aaKnown RBP7.16□□□□□ -1.26
RRN3YKL125W SPA2P23201 1466 aaKnown RBP7.16□□□□□ -1.26
RRN3YKL125W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
RRN3YKL125W LEO1P38439 464 aa7.11□□□□□ -1.27
RRN3YKL125W YAH1Q12184 172 aaKnown RBP7.11□□□□□ -1.27
RRN3YKL125W YLR271WQ06152 274 aa7.06□□□□□ -1.28
RRN3YKL125W YIL055CP40523 627 aaKnown RBP7.05□□□□□ -1.28
RRN3YKL125W YKR023WP36119 530 aaKnown RBP7.04□□□□□ -1.28
RRN3YKL125W RPS0BP46654 252 aaKnown RBP7.04□□□□□ -1.28
RRN3YKL125W SSN2P38931 1420 aa7.01□□□□□ -1.29
RRN3YKL125W TCB2P48231 1178 aa7□□□□□ -1.29
RRN3YKL125W SAS10Q12136 610 aaPredicted RBP6.98□□□□□ -1.29
RRN3YKL125W CWC22P53333 577 aaKnown RBP6.98□□□□□ -1.29
RRN3YKL125W MGA2P40578 1113 aa6.97□□□□□ -1.29
RRN3YKL125W ENP1P38333 483 aaKnown RBP6.96□□□□□ -1.3
RRN3YKL125W RSM7P47150 247 aa6.96□□□□□ -1.3
RRN3YKL125W LEU3P08638 886 aa6.94□□□□□ -1.3
RRN3YKL125W TCB3Q03640 1545 aaKnown RBP6.92□□□□□ -1.3
RRN3YKL125W KRI1P42846 591 aaKnown RBP6.9□□□□□ -1.3
RRN3YKL125W SGS1P35187 1447 aa6.9□□□□□ -1.3
RRN3YKL125W TFC8Q12308 588 aa6.9□□□□□ -1.31
RRN3YKL125W MRPL32P25348 183 aa6.87□□□□□ -1.31
RRN3YKL125W HOP09932 586 aa6.87□□□□□ -1.31
RRN3YKL125W CST9Q06032 482 aa6.86□□□□□ -1.31
RRN3YKL125W CLC1P17891 233 aa6.83□□□□□ -1.32
RRN3YKL125W PSD2P53037 1138 aaKnown RBP6.83□□□□□ -1.32
RRN3YKL125W ENV11P53246 860 aa6.83□□□□□ -1.32
RRN3YKL125W YRB30P53107 440 aaPredicted RBP6.82□□□□□ -1.32
RRN3YKL125W SEC3P33332 1336 aaKnown RBP6.81□□□□□ -1.32
RRN3YKL125W IME2P32581 645 aa6.81□□□□□ -1.32
RRN3YKL125W MNN4P36044 1178 aa6.81□□□□□ -1.32
RRN3YKL125W STH1P32597 1359 aa6.8□□□□□ -1.32
RRN3YKL125W AI2P03876 854 aa6.79□□□□□ -1.32
RRN3YKL125W DCD1P06773 312 aa6.79□□□□□ -1.32
RRN3YKL125W AIM44Q99299 758 aa6.79□□□□□ -1.32
RRN3YKL125W SPT7P35177 1332 aa6.78□□□□□ -1.32
RRN3YKL125W NUG1P40010 520 aaKnown RBP6.77□□□□□ -1.33
RRN3YKL125W NOP53Q12080 455 aaKnown RBP6.77□□□□□ -1.33
RRN3YKL125W RLF2Q12495 606 aa6.77□□□□□ -1.33
RRN3YKL125W YGR130CP53278 816 aa6.77□□□□□ -1.33
RRN3YKL125W CDC27P38042 758 aa6.76□□□□□ -1.33
RRN3YKL125W PRS1P32895 427 aaKnown RBP6.75□□□□□ -1.33
RRN3YKL125W DEF1P35732 738 aaKnown RBP6.75□□□□□ -1.33
RRN3YKL125W FPR3P38911 411 aaKnown RBP6.74□□□□□ -1.33
RRN3YKL125W QCR6P00127 147 aa6.72□□□□□ -1.33
RRN3YKL125W BBC1P47068 1157 aa6.72□□□□□ -1.33
RRN3YKL125W BCH2P36122 765 aa6.7□□□□□ -1.34
RRN3YKL125W OPY1P38271 328 aa6.7□□□□□ -1.34
RRN3YKL125W RAM2P29703 316 aa6.7□□□□□ -1.34
RRN3YKL125W RPN1P38764 993 aaKnown RBP6.7□□□□□ -1.34
RRN3YKL125W UFD4P33202 1483 aa6.67□□□□□ -1.34
RRN3YKL125W MMS22Q06164 1454 aa6.67□□□□□ -1.34
RRN3YKL125W SET1P38827 1080 aaKnown RBP6.65□□□□□ -1.34
RRN3YKL125W CHD1P32657 1468 aa6.65□□□□□ -1.35
RRN3YKL125W FPR4Q06205 392 aaPredicted RBP6.64□□□□□ -1.35
RRN3YKL125W ECM5Q03214 1411 aa6.64□□□□□ -1.35
RRN3YKL125W POL5P39985 1022 aaKnown RBP6.64□□□□□ -1.35
RRN3YKL125W PSH1Q12161 406 aa6.64□□□□□ -1.35
RRN3YKL125W EPS1P40557 701 aa6.63□□□□□ -1.35
RRN3YKL125W CKB1P43639 278 aa6.63□□□□□ -1.35
RRN3YKL125W CFT1Q06632 1357 aaKnown RBP6.62□□□□□ -1.35
RRN3YKL125W YGL015CP33199 130 aa6.62□□□□□ -1.35
RRN3YKL125W MRM1P25270 412 aa6.61□□□□□ -1.35
RRN3YKL125W IFH1P39520 1085 aa6.61□□□□□ -1.35
RRN3YKL125W IOC4Q04213 475 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms