RNA–Protein interactions for RNA: YJR097W

JJJ3, Transcript of Protein of unknown function, yeast

Gene JJJ3, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
JJJ3	YJR097W	MTC1	P47018	478 aa	Known RBP	18.03	■□□□□ 0.48
JJJ3	YJR097W	DRS1	P32892	752 aa	Known RBP	17.42	■□□□□ 0.38
JJJ3	YJR097W	FAP1	P53971	965 aa		15.77	■□□□□ 0.12
JJJ3	YJR097W	DIP2	Q12220	943 aa	Predicted RBP	15.06	■□□□□ 0
JJJ3	YJR097W	PRI1	P10363	409 aa		14.9	□□□□□ -0.02
JJJ3	YJR097W	ISW2	Q08773	1120 aa		14.86	□□□□□ -0.03
JJJ3	YJR097W	PRY3	P47033	881 aa		14.78	□□□□□ -0.04
JJJ3	YJR097W	AAD16	Q02895	342 aa		14.77	□□□□□ -0.05
JJJ3	YJR097W	BFR2	Q06631	534 aa	Known RBP	14.73	□□□□□ -0.05
JJJ3	YJR097W	RPG1	P38249	964 aa	Known RBP	14.72	□□□□□ -0.05
JJJ3	YJR097W	AVT3	P36062	692 aa		14.6	□□□□□ -0.07
JJJ3	YJR097W	RSE1	Q04693	1361 aa	Known RBP	14.41	□□□□□ -0.1
JJJ3	YJR097W	TSR3	Q12094	313 aa	Known RBP	14.2	□□□□□ -0.14
JJJ3	YJR097W	RPL17A	P05740	184 aa	Known RBP	13.96	□□□□□ -0.17
JJJ3	YJR097W	RPL17B	P46990	184 aa	Known RBP	13.96	□□□□□ -0.17
JJJ3	YJR097W	REB1	P21538	810 aa		13.86	□□□□□ -0.19
JJJ3	YJR097W	YCK3	P39962	524 aa		13.86	□□□□□ -0.19
JJJ3	YJR097W	HAA1	Q12753	694 aa	Known RBP	13.81	□□□□□ -0.2
JJJ3	YJR097W	MRPL32	P25348	183 aa		13.61	□□□□□ -0.23
JJJ3	YJR097W	SPT21	P35209	758 aa		13.3	□□□□□ -0.28
JJJ3	YJR097W	TFA1	P36100	482 aa		13.24	□□□□□ -0.29
JJJ3	YJR097W	YKR023W	P36119	530 aa	Known RBP	13.07	□□□□□ -0.32
JJJ3	YJR097W	CDC27	P38042	758 aa		13.01	□□□□□ -0.33
JJJ3	YJR097W	RIM101	P33400	625 aa		12.95	□□□□□ -0.34
JJJ3	YJR097W	HO	P09932	586 aa		12.88	□□□□□ -0.35
JJJ3	YJR097W	YGL015C	P33199	130 aa		12.86	□□□□□ -0.35
JJJ3	YJR097W	DCD1	P06773	312 aa		12.82	□□□□□ -0.36
JJJ3	YJR097W	TFC8	Q12308	588 aa		12.81	□□□□□ -0.36
JJJ3	YJR097W	OXP1	P28273	1286 aa		12.57	□□□□□ -0.4
JJJ3	YJR097W	MAP2	P38174	421 aa	Known RBP	12.55	□□□□□ -0.4
JJJ3	YJR097W	UBP10	P53874	792 aa	Predicted RBP	12.51	□□□□□ -0.41
JJJ3	YJR097W	YIL055C	P40523	627 aa	Known RBP	12.44	□□□□□ -0.42
JJJ3	YJR097W	PTP3	P40048	928 aa		12.43	□□□□□ -0.42
JJJ3	YJR097W	BCH2	P36122	765 aa		12.42	□□□□□ -0.42
JJJ3	YJR097W	SCY1	P53009	804 aa		12.41	□□□□□ -0.42
JJJ3	YJR097W	YAH1	Q12184	172 aa	Known RBP	12.37	□□□□□ -0.43
JJJ3	YJR097W	RSM7	P47150	247 aa		12.21	□□□□□ -0.45
JJJ3	YJR097W	SLX5	P32828	619 aa	Known RBP	12.19	□□□□□ -0.46
JJJ3	YJR097W	EPS1	P40557	701 aa		12.16	□□□□□ -0.46
JJJ3	YJR097W	YLR271W	Q06152	274 aa		12.1	□□□□□ -0.47
JJJ3	YJR097W	BDF1	P35817	686 aa		12.08	□□□□□ -0.48
JJJ3	YJR097W	AI2	P03876	854 aa		12.07	□□□□□ -0.48
JJJ3	YJR097W	SSP1	P38871	571 aa		12.07	□□□□□ -0.48
JJJ3	YJR097W	TIF4632	P39936	914 aa	Known RBP	12.05	□□□□□ -0.48
JJJ3	YJR097W	BBC1	P47068	1157 aa		12.04	□□□□□ -0.48
JJJ3	YJR097W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.96	□□□□□ -0.49	not detected
JJJ3	YJR097W	TGL3	P40308	642 aa		11.93	□□□□□ -0.5
JJJ3	YJR097W	PSD2	P53037	1138 aa	Known RBP	11.82	□□□□□ -0.52
JJJ3	YJR097W	CST9	Q06032	482 aa		11.72	□□□□□ -0.53
JJJ3	YJR097W	MGA2	P40578	1113 aa		11.71	□□□□□ -0.53
JJJ3	YJR097W	MRM1	P25270	412 aa		11.68	□□□□□ -0.54
JJJ3	YJR097W	RQC2	Q12532	1038 aa	Known RBP	11.55	□□□□□ -0.56
JJJ3	YJR097W	BUD31	P25337	157 aa	Predicted RBP	11.54	□□□□□ -0.56
JJJ3	YJR097W	YOR238W	Q08634	303 aa		11.53	□□□□□ -0.56
JJJ3	YJR097W	YAP5	P40574	245 aa		11.52	□□□□□ -0.57
JJJ3	YJR097W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.49	□□□□□ -0.57	RIP-Chip
JJJ3	YJR097W	UBP9	P39967	754 aa		11.45	□□□□□ -0.58
JJJ3	YJR097W	MST1	P07236	462 aa		11.44	□□□□□ -0.58
JJJ3	YJR097W	RTG3	P38165	486 aa		11.43	□□□□□ -0.58
JJJ3	YJR097W	PIB1	Q06651	286 aa		11.42	□□□□□ -0.58
JJJ3	YJR097W	RCR1	P38212	213 aa		11.39	□□□□□ -0.59
JJJ3	YJR097W	VPS29	P38759	282 aa		11.35	□□□□□ -0.59
JJJ3	YJR097W	GTT3	P39996	337 aa		11.31	□□□□□ -0.6
JJJ3	YJR097W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.31	□□□□□ -0.6	not detected
JJJ3	YJR097W	YFR006W	P43590	535 aa		11.3	□□□□□ -0.6
JJJ3	YJR097W	YBL029C-A	Q3E756	94 aa		11.3	□□□□□ -0.6
JJJ3	YJR097W	DBP1	P24784	617 aa	Known RBP	11.29	□□□□□ -0.6
JJJ3	YJR097W	WSC3	Q12215	556 aa		11.26	□□□□□ -0.61
JJJ3	YJR097W	STS1	P38637	319 aa		11.24	□□□□□ -0.61
JJJ3	YJR097W	VNX1	P42839	908 aa		11.16	□□□□□ -0.62
JJJ3	YJR097W	RAM2	P29703	316 aa		11.15	□□□□□ -0.62
JJJ3	YJR097W	SIS1	P25294	352 aa	Known RBP	11.11	□□□□□ -0.63
JJJ3	YJR097W	VMA1	P17255	1071 aa	Known RBP	11.09	□□□□□ -0.63
JJJ3	YJR097W	SPP1	Q03012	353 aa		11.09	□□□□□ -0.63
JJJ3	YJR097W	SET4	P42948	560 aa		11.03	□□□□□ -0.64
JJJ3	YJR097W	MAK11	P20484	414 aa	Known RBP	11.02	□□□□□ -0.65
JJJ3	YJR097W	YOL036W	Q08206	761 aa		11.01	□□□□□ -0.65
JJJ3	YJR097W	MIF2	P35201	549 aa		11	□□□□□ -0.65
JJJ3	YJR097W	TIF11	P38912	153 aa	Known RBP	11	□□□□□ -0.65
JJJ3	YJR097W	ULI1	P43604	169 aa		10.95	□□□□□ -0.66
JJJ3	YJR097W	SAM3	Q08986	587 aa		10.95	□□□□□ -0.66
JJJ3	YJR097W	MSB4	Q12317	492 aa		10.95	□□□□□ -0.66
JJJ3	YJR097W	TAF7	Q05021	590 aa		10.93	□□□□□ -0.66
JJJ3	YJR097W	COQ8	P27697	501 aa		10.9	□□□□□ -0.66
JJJ3	YJR097W	GYP5	Q12344	894 aa		10.9	□□□□□ -0.66
JJJ3	YJR097W	EDS1	P38073	919 aa		10.89	□□□□□ -0.67
JJJ3	YJR097W	EAP1	P36041	632 aa	Known RBP	10.88	□□□□□ -0.67
JJJ3	YJR097W	TRP5	P00931	707 aa	Known RBP	10.85	□□□□□ -0.67
JJJ3	YJR097W	IOC2	Q12072	812 aa		10.85	□□□□□ -0.67
JJJ3	YJR097W	LDB19	Q12502	818 aa		10.85	□□□□□ -0.67
JJJ3	YJR097W	DCW1	P36091	449 aa		10.84	□□□□□ -0.67
JJJ3	YJR097W	PTC3	P34221	468 aa	Known RBP	10.83	□□□□□ -0.68
JJJ3	YJR097W	GRE2	Q12068	342 aa	Known RBP	10.82	□□□□□ -0.68
JJJ3	YJR097W	ATH1	P48016	1211 aa		10.78	□□□□□ -0.68
JJJ3	YJR097W	HTA1	P04911	132 aa	Known RBP	10.76	□□□□□ -0.69
JJJ3	YJR097W	HTA2	P04912	132 aa		10.76	□□□□□ -0.69
JJJ3	YJR097W	ABP1	P15891	592 aa	Known RBP	10.76	□□□□□ -0.69
JJJ3	YJR097W	SET1	P38827	1080 aa	Known RBP	10.75	□□□□□ -0.69
JJJ3	YJR097W	FKH1	P40466	484 aa		10.74	□□□□□ -0.69
JJJ3	YJR097W	RTG1	P32607	177 aa		10.73	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms