RNA–Protein interactions for RNA: YHR134W

WSS1, Transcript of Metalloprotease involved in DNA repair, removes DNA-protein crosslinks at stalled replication forks during replication of damaged DNA, yeastyeast

Gene WSS1, Length 810 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WSS1YHR134W MTC1P47018 478 aaKnown RBP15.95■□□□□ 0.14
WSS1YHR134W DRS1P32892 752 aaKnown RBP15.67■□□□□ 0.1
WSS1YHR134W FAP1P53971 965 aa14.4□□□□□ -0.1
WSS1YHR134W PRY3P47033 881 aa13.57□□□□□ -0.24
WSS1YHR134W DIP2Q12220 943 aaPredicted RBP13.46□□□□□ -0.25
WSS1YHR134W BFR2Q06631 534 aaKnown RBP13.44□□□□□ -0.26
WSS1YHR134W AVT3P36062 692 aa13.27□□□□□ -0.29
WSS1YHR134W ISW2Q08773 1120 aa13.03□□□□□ -0.32
WSS1YHR134W AAD16Q02895 342 aa13□□□□□ -0.33
WSS1YHR134W PRI1P10363 409 aa12.98□□□□□ -0.33
WSS1YHR134W RPG1P38249 964 aaKnown RBP12.81□□□□□ -0.36
WSS1YHR134W RSE1Q04693 1361 aaKnown RBP12.81□□□□□ -0.36
WSS1YHR134W YCK3P39962 524 aa12.75□□□□□ -0.37
WSS1YHR134W HAA1Q12753 694 aaKnown RBP12.65□□□□□ -0.38
WSS1YHR134W TFA1P36100 482 aa12.58□□□□□ -0.4
WSS1YHR134W RPL17AP05740 184 aaKnown RBP12.29□□□□□ -0.44
WSS1YHR134W RPL17BP46990 184 aaKnown RBP12.29□□□□□ -0.44
WSS1YHR134W TSR3Q12094 313 aaKnown RBP12.21□□□□□ -0.45
WSS1YHR134W REB1P21538 810 aa12.14□□□□□ -0.47
WSS1YHR134W SPT21P35209 758 aa11.91□□□□□ -0.5
WSS1YHR134W MRPL32P25348 183 aa11.8□□□□□ -0.52
WSS1YHR134W RIM101P33400 625 aa11.71□□□□□ -0.53
WSS1YHR134W YKR023WP36119 530 aaKnown RBP11.55□□□□□ -0.56
WSS1YHR134W YGL015CP33199 130 aa11.51□□□□□ -0.57
WSS1YHR134W CDC27P38042 758 aa11.34□□□□□ -0.59
WSS1YHR134W TFC8Q12308 588 aa11.33□□□□□ -0.6
WSS1YHR134W OXP1P28273 1286 aa11.29□□□□□ -0.6
WSS1YHR134W HOP09932 586 aa11.22□□□□□ -0.61
WSS1YHR134W DCD1P06773 312 aa11.09□□□□□ -0.63
WSS1YHR134W YIL055CP40523 627 aaKnown RBP11.09□□□□□ -0.63
WSS1YHR134W SSP1P38871 571 aa11.02□□□□□ -0.65
WSS1YHR134W BUD31P25337 157 aaPredicted RBP11.01□□□□□ -0.65
WSS1YHR134W UBP10P53874 792 aaPredicted RBP11.01□□□□□ -0.65
WSS1YHR134W PTP3P40048 928 aa11□□□□□ -0.65
WSS1YHR134W RSM7P47150 247 aa10.97□□□□□ -0.65
WSS1YHR134W BCH2P36122 765 aa10.96□□□□□ -0.65
WSS1YHR134W YAH1Q12184 172 aaKnown RBP10.95□□□□□ -0.66
WSS1YHR134W YLR271WQ06152 274 aa10.92□□□□□ -0.66
WSS1YHR134W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.89□□□□□ -0.67not detected
WSS1YHR134W MAP2P38174 421 aaKnown RBP10.88□□□□□ -0.67
WSS1YHR134W SCY1P53009 804 aa10.8□□□□□ -0.68
WSS1YHR134W AI2P03876 854 aa10.78□□□□□ -0.68
WSS1YHR134W EPS1P40557 701 aa10.76□□□□□ -0.69
WSS1YHR134W BBC1P47068 1157 aa10.74□□□□□ -0.69
WSS1YHR134W PSD2P53037 1138 aaKnown RBP10.71□□□□□ -0.69
WSS1YHR134W BDF1P35817 686 aa10.69□□□□□ -0.7
WSS1YHR134W MGA2P40578 1113 aa10.69□□□□□ -0.7
WSS1YHR134W SLX5P32828 619 aaKnown RBP10.66□□□□□ -0.7
WSS1YHR134W CST9Q06032 482 aa10.54□□□□□ -0.72
WSS1YHR134W TIF4632P39936 914 aaKnown RBP10.51□□□□□ -0.73
WSS1YHR134W TGL3P40308 642 aa10.51□□□□□ -0.73
WSS1YHR134W MRM1P25270 412 aa10.39□□□□□ -0.75
WSS1YHR134W SIS1P25294 352 aaKnown RBP10.39□□□□□ -0.75
WSS1YHR134W NSR1P27476 414 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75 RIP-Chip
WSS1YHR134W RQC2Q12532 1038 aaKnown RBP10.37□□□□□ -0.75
WSS1YHR134W UBP9P39967 754 aa10.31□□□□□ -0.76
WSS1YHR134W RTG3P38165 486 aa10.3□□□□□ -0.76
WSS1YHR134W VPS29P38759 282 aa10.22□□□□□ -0.77
WSS1YHR134W MST1P07236 462 aa10.2□□□□□ -0.78
WSS1YHR134W YAP5P40574 245 aa10.2□□□□□ -0.78
WSS1YHR134W RCR1P38212 213 aa10.19□□□□□ -0.78
WSS1YHR134W RAM2P29703 316 aa10.18□□□□□ -0.78
WSS1YHR134W YMR1P47147 688 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
WSS1YHR134W YOR238WQ08634 303 aa10.15□□□□□ -0.78
WSS1YHR134W DMA1P38823 416 aa10.14□□□□□ -0.79
WSS1YHR134W MAK11P20484 414 aaKnown RBP10.09□□□□□ -0.79
WSS1YHR134W DBP1P24784 617 aaKnown RBP10.05□□□□□ -0.8
WSS1YHR134W STS1P38637 319 aa10.05□□□□□ -0.8
WSS1YHR134W NOP53Q12080 455 aaKnown RBP9.98□□□□□ -0.81
WSS1YHR134W YFR006WP43590 535 aa9.95□□□□□ -0.82
WSS1YHR134W VMA1P17255 1071 aaKnown RBP9.92□□□□□ -0.82
WSS1YHR134W PIB1Q06651 286 aa9.91□□□□□ -0.82
WSS1YHR134W SAM3Q08986 587 aa9.91□□□□□ -0.82
WSS1YHR134W COQ8P27697 501 aa9.9□□□□□ -0.82
WSS1YHR134W SET1P38827 1080 aaKnown RBP9.89□□□□□ -0.83
WSS1YHR134W GTT3P39996 337 aa9.88□□□□□ -0.83
WSS1YHR134W EDS1P38073 919 aa9.86□□□□□ -0.83
WSS1YHR134W SAS10Q12136 610 aaPredicted RBP9.86□□□□□ -0.83
WSS1YHR134W IFH1P39520 1085 aa9.84□□□□□ -0.83
WSS1YHR134W MIF2P35201 549 aa9.82□□□□□ -0.84
WSS1YHR134W YPR148CQ06523 435 aa9.82□□□□□ -0.84
WSS1YHR134W MSB4Q12317 492 aa9.81□□□□□ -0.84
WSS1YHR134W PTC3P34221 468 aaKnown RBP9.8□□□□□ -0.84
WSS1YHR134W YBL029C-AQ3E756 94 aa9.79□□□□□ -0.84
WSS1YHR134W ABP1P15891 592 aaKnown RBP9.77□□□□□ -0.85
WSS1YHR134W VNX1P42839 908 aa9.76□□□□□ -0.85
WSS1YHR134W YOL036WQ08206 761 aa9.76□□□□□ -0.85
WSS1YHR134W GYP5Q12344 894 aa9.73□□□□□ -0.85
WSS1YHR134W GRE2Q12068 342 aaKnown RBP9.72□□□□□ -0.85
WSS1YHR134W GUT1P32190 709 aa9.71□□□□□ -0.86
WSS1YHR134W WSC3Q12215 556 aa9.71□□□□□ -0.86
WSS1YHR134W EAP1P36041 632 aaKnown RBP9.7□□□□□ -0.86
WSS1YHR134W TIF11P38912 153 aaKnown RBP9.67□□□□□ -0.86
WSS1YHR134W ATH1P48016 1211 aa9.67□□□□□ -0.86
WSS1YHR134W SET4P42948 560 aa9.66□□□□□ -0.86
WSS1YHR134W CKB1P43639 278 aa9.65□□□□□ -0.86
WSS1YHR134W SPP1Q03012 353 aa9.64□□□□□ -0.87
WSS1YHR134W HTA1P04911 132 aaKnown RBP9.61□□□□□ -0.87
WSS1YHR134W HTA2P04912 132 aa9.61□□□□□ -0.87
WSS1YHR134W VPS70P47161 811 aa9.61□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms