RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C MTC1P47018 478 aaKnown RBP13.46□□□□□ -0.25
RTA1YGR213C DRS1P32892 752 aaKnown RBP13.34□□□□□ -0.27
RTA1YGR213C BFR2Q06631 534 aaKnown RBP11.47□□□□□ -0.57
RTA1YGR213C DIP2Q12220 943 aaPredicted RBP11.42□□□□□ -0.58
RTA1YGR213C AVT3P36062 692 aa11.26□□□□□ -0.61
RTA1YGR213C FAP1P53971 965 aa11.16□□□□□ -0.62
RTA1YGR213C ISW2Q08773 1120 aa10.96□□□□□ -0.65
RTA1YGR213C PRI1P10363 409 aa10.9□□□□□ -0.66
RTA1YGR213C RSE1Q04693 1361 aaKnown RBP10.82□□□□□ -0.68
RTA1YGR213C RPG1P38249 964 aaKnown RBP10.82□□□□□ -0.68
RTA1YGR213C TFA1P36100 482 aa10.73□□□□□ -0.69
RTA1YGR213C AAD16Q02895 342 aa10.72□□□□□ -0.69
RTA1YGR213C PRY3P47033 881 aa10.46□□□□□ -0.73
RTA1YGR213C RPL17AP05740 184 aaKnown RBP10.41□□□□□ -0.74
RTA1YGR213C RPL17BP46990 184 aaKnown RBP10.41□□□□□ -0.74
RTA1YGR213C TSR3Q12094 313 aaKnown RBP10.32□□□□□ -0.76
RTA1YGR213C REB1P21538 810 aa10.28□□□□□ -0.76
RTA1YGR213C SPT21P35209 758 aa10.06□□□□□ -0.8
RTA1YGR213C YCK3P39962 524 aa9.95□□□□□ -0.82
RTA1YGR213C MRPL32P25348 183 aa9.92□□□□□ -0.82
RTA1YGR213C RIM101P33400 625 aa9.89□□□□□ -0.83
RTA1YGR213C HAA1Q12753 694 aaKnown RBP9.89□□□□□ -0.83
RTA1YGR213C YKR023WP36119 530 aaKnown RBP9.76□□□□□ -0.85
RTA1YGR213C CDC27P38042 758 aa9.58□□□□□ -0.88
RTA1YGR213C OXP1P28273 1286 aa9.57□□□□□ -0.88
RTA1YGR213C TFC8Q12308 588 aa9.55□□□□□ -0.88
RTA1YGR213C HOP09932 586 aa9.53□□□□□ -0.88
RTA1YGR213C DCD1P06773 312 aa9.45□□□□□ -0.9
RTA1YGR213C PTP3P40048 928 aa9.4□□□□□ -0.9
RTA1YGR213C YIL055CP40523 627 aaKnown RBP9.4□□□□□ -0.9
RTA1YGR213C SSP1P38871 571 aa9.36□□□□□ -0.91
RTA1YGR213C YAH1Q12184 172 aaKnown RBP9.36□□□□□ -0.91
RTA1YGR213C YGL015CP33199 130 aa9.3□□□□□ -0.92
RTA1YGR213C RSM7P47150 247 aa9.28□□□□□ -0.92
RTA1YGR213C YLR271WQ06152 274 aa9.28□□□□□ -0.92
RTA1YGR213C BCH2P36122 765 aa9.27□□□□□ -0.93
RTA1YGR213C UBP10P53874 792 aaPredicted RBP9.22□□□□□ -0.93
RTA1YGR213C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
RTA1YGR213C MAP2P38174 421 aaKnown RBP9.18□□□□□ -0.94
RTA1YGR213C SCY1P53009 804 aa9.14□□□□□ -0.95
RTA1YGR213C AI2P03876 854 aa9.12□□□□□ -0.95
RTA1YGR213C EPS1P40557 701 aa9.1□□□□□ -0.95
RTA1YGR213C BBC1P47068 1157 aa9.07□□□□□ -0.96
RTA1YGR213C PSD2P53037 1138 aaKnown RBP9.06□□□□□ -0.96
RTA1YGR213C MGA2P40578 1113 aa9.05□□□□□ -0.96
RTA1YGR213C BDF1P35817 686 aa9.04□□□□□ -0.96
RTA1YGR213C SLX5P32828 619 aaKnown RBP8.98□□□□□ -0.97
RTA1YGR213C CST9Q06032 482 aa8.98□□□□□ -0.97
RTA1YGR213C RQC2Q12532 1038 aaKnown RBP8.88□□□□□ -0.99
RTA1YGR213C MRM1P25270 412 aa8.83□□□□□ -1
RTA1YGR213C TIF4632P39936 914 aaKnown RBP8.81□□□□□ -1
RTA1YGR213C TGL3P40308 642 aa8.78□□□□□ -1
RTA1YGR213C DMA1P38823 416 aa8.74□□□□□ -1.01
RTA1YGR213C RTG3P38165 486 aa8.71□□□□□ -1.02
RTA1YGR213C RCR1P38212 213 aa8.69□□□□□ -1.02
RTA1YGR213C NSR1P27476 414 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
RTA1YGR213C RAM2P29703 316 aa8.65□□□□□ -1.02
RTA1YGR213C VPS29P38759 282 aa8.65□□□□□ -1.02
RTA1YGR213C YAP5P40574 245 aa8.58□□□□□ -1.04
RTA1YGR213C YMR1P47147 688 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
RTA1YGR213C YOR238WQ08634 303 aa8.54□□□□□ -1.04
RTA1YGR213C MAK11P20484 414 aaKnown RBP8.53□□□□□ -1.04
RTA1YGR213C MST1P07236 462 aa8.52□□□□□ -1.05
RTA1YGR213C STS1P38637 319 aa8.52□□□□□ -1.05
RTA1YGR213C DBP1P24784 617 aaKnown RBP8.51□□□□□ -1.05
RTA1YGR213C YFR006WP43590 535 aa8.48□□□□□ -1.05
RTA1YGR213C PIB1Q06651 286 aa8.45□□□□□ -1.06
RTA1YGR213C SET1P38827 1080 aaKnown RBP8.41□□□□□ -1.06
RTA1YGR213C COQ8P27697 501 aa8.4□□□□□ -1.06
RTA1YGR213C SAS10Q12136 610 aaPredicted RBP8.38□□□□□ -1.07
RTA1YGR213C VMA1P17255 1071 aaKnown RBP8.37□□□□□ -1.07
RTA1YGR213C EDS1P38073 919 aa8.36□□□□□ -1.07
RTA1YGR213C MIF2P35201 549 aa8.35□□□□□ -1.07
RTA1YGR213C NOP53Q12080 455 aaKnown RBP8.35□□□□□ -1.07
RTA1YGR213C GTT3P39996 337 aa8.33□□□□□ -1.08
RTA1YGR213C SAM3Q08986 587 aa8.31□□□□□ -1.08
RTA1YGR213C YPR148CQ06523 435 aa8.3□□□□□ -1.08
RTA1YGR213C PTC3P34221 468 aaKnown RBP8.29□□□□□ -1.08
RTA1YGR213C IFH1P39520 1085 aa8.29□□□□□ -1.08
RTA1YGR213C UBP9P39967 754 aa8.25□□□□□ -1.09
RTA1YGR213C YOL036WQ08206 761 aa8.23□□□□□ -1.09
RTA1YGR213C WSC3Q12215 556 aa8.22□□□□□ -1.09
RTA1YGR213C YBL029C-AQ3E756 94 aa8.22□□□□□ -1.09
RTA1YGR213C VPS70P47161 811 aa8.21□□□□□ -1.1
RTA1YGR213C GRE2Q12068 342 aaKnown RBP8.21□□□□□ -1.1
RTA1YGR213C GYP5Q12344 894 aa8.21□□□□□ -1.1
RTA1YGR213C MSB4Q12317 492 aa8.2□□□□□ -1.1
RTA1YGR213C VNX1P42839 908 aa8.19□□□□□ -1.1
RTA1YGR213C BUD31P25337 157 aaPredicted RBP8.18□□□□□ -1.1
RTA1YGR213C GUT1P32190 709 aa8.18□□□□□ -1.1
RTA1YGR213C SET4P42948 560 aa8.18□□□□□ -1.1
RTA1YGR213C ATH1P48016 1211 aa8.18□□□□□ -1.1
RTA1YGR213C ABP1P15891 592 aaKnown RBP8.17□□□□□ -1.1
RTA1YGR213C CKB1P43639 278 aa8.16□□□□□ -1.1
RTA1YGR213C DCW1P36091 449 aa8.12□□□□□ -1.11
RTA1YGR213C EAP1P36041 632 aaKnown RBP8.11□□□□□ -1.11
RTA1YGR213C TIF11P38912 153 aaKnown RBP8.11□□□□□ -1.11
RTA1YGR213C SPP1Q03012 353 aa8.1□□□□□ -1.11
RTA1YGR213C HTA1P04911 132 aaKnown RBP8.09□□□□□ -1.11
RTA1YGR213C HTA2P04912 132 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 130 ms