RNA–Protein interactions for RNA: YCL037C

SRO9, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SRO9, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO9YCL037C MTC1P47018 478 aaKnown RBP15.13■□□□□ 0.01
SRO9YCL037C DRS1P32892 752 aaKnown RBP14.77□□□□□ -0.04
SRO9YCL037C FAP1P53971 965 aa13.03□□□□□ -0.32
SRO9YCL037C DIP2Q12220 943 aaPredicted RBP12.71□□□□□ -0.37
SRO9YCL037C BFR2Q06631 534 aaKnown RBP12.58□□□□□ -0.4
SRO9YCL037C ISW2Q08773 1120 aa12.43□□□□□ -0.42
SRO9YCL037C PRI1P10363 409 aa12.39□□□□□ -0.43
SRO9YCL037C AVT3P36062 692 aa12.38□□□□□ -0.43
SRO9YCL037C RPG1P38249 964 aaKnown RBP12.28□□□□□ -0.44
SRO9YCL037C AAD16Q02895 342 aa12.26□□□□□ -0.45
SRO9YCL037C PRY3P47033 881 aa12.19□□□□□ -0.46
SRO9YCL037C RSE1Q04693 1361 aaKnown RBP12.13□□□□□ -0.47
SRO9YCL037C TSR3Q12094 313 aaKnown RBP11.8□□□□□ -0.52
SRO9YCL037C RPL17AP05740 184 aaKnown RBP11.72□□□□□ -0.53
SRO9YCL037C RPL17BP46990 184 aaKnown RBP11.72□□□□□ -0.53
SRO9YCL037C REB1P21538 810 aa11.64□□□□□ -0.55
SRO9YCL037C TFA1P36100 482 aa11.44□□□□□ -0.58
SRO9YCL037C YCK3P39962 524 aa11.42□□□□□ -0.58
SRO9YCL037C HAA1Q12753 694 aaKnown RBP11.41□□□□□ -0.58
SRO9YCL037C MRPL32P25348 183 aa11.33□□□□□ -0.6
SRO9YCL037C SPT21P35209 758 aa11.2□□□□□ -0.62
SRO9YCL037C RIM101P33400 625 aa10.94□□□□□ -0.66
SRO9YCL037C YKR023WP36119 530 aaKnown RBP10.94□□□□□ -0.66
SRO9YCL037C CDC27P38042 758 aa10.84□□□□□ -0.67
SRO9YCL037C HOP09932 586 aa10.77□□□□□ -0.69
SRO9YCL037C TFC8Q12308 588 aa10.73□□□□□ -0.69
SRO9YCL037C DCD1P06773 312 aa10.72□□□□□ -0.69
SRO9YCL037C YGL015CP33199 130 aa10.67□□□□□ -0.7
SRO9YCL037C OXP1P28273 1286 aa10.59□□□□□ -0.71
SRO9YCL037C YIL055CP40523 627 aaKnown RBP10.51□□□□□ -0.73
SRO9YCL037C PTP3P40048 928 aa10.49□□□□□ -0.73
SRO9YCL037C YAH1Q12184 172 aaKnown RBP10.46□□□□□ -0.73
SRO9YCL037C MAP2P38174 421 aaKnown RBP10.45□□□□□ -0.74
SRO9YCL037C UBP10P53874 792 aaPredicted RBP10.45□□□□□ -0.74
SRO9YCL037C BCH2P36122 765 aa10.4□□□□□ -0.74
SRO9YCL037C SCY1P53009 804 aa10.37□□□□□ -0.75
SRO9YCL037C RSM7P47150 247 aa10.3□□□□□ -0.76
SRO9YCL037C SSP1P38871 571 aa10.28□□□□□ -0.76
SRO9YCL037C YLR271WQ06152 274 aa10.23□□□□□ -0.77
SRO9YCL037C EPS1P40557 701 aa10.21□□□□□ -0.78
SRO9YCL037C SLX5P32828 619 aaKnown RBP10.19□□□□□ -0.78
SRO9YCL037C AI2P03876 854 aa10.17□□□□□ -0.78
SRO9YCL037C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
SRO9YCL037C BBC1P47068 1157 aa10.16□□□□□ -0.78
SRO9YCL037C BDF1P35817 686 aa10.14□□□□□ -0.79
SRO9YCL037C TIF4632P39936 914 aaKnown RBP10.06□□□□□ -0.8
SRO9YCL037C PSD2P53037 1138 aaKnown RBP10□□□□□ -0.81
SRO9YCL037C TGL3P40308 642 aa9.95□□□□□ -0.82
SRO9YCL037C MGA2P40578 1113 aa9.95□□□□□ -0.82
SRO9YCL037C CST9Q06032 482 aa9.92□□□□□ -0.82
SRO9YCL037C MRM1P25270 412 aa9.86□□□□□ -0.83
SRO9YCL037C RTG3P38165 486 aa9.67□□□□□ -0.86
SRO9YCL037C NSR1P27476 414 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
SRO9YCL037C YAP5P40574 245 aa9.66□□□□□ -0.86
SRO9YCL037C YOR238WQ08634 303 aa9.64□□□□□ -0.87
SRO9YCL037C RCR1P38212 213 aa9.62□□□□□ -0.87
SRO9YCL037C PIB1Q06651 286 aa9.57□□□□□ -0.88
SRO9YCL037C VPS29P38759 282 aa9.56□□□□□ -0.88
SRO9YCL037C MST1P07236 462 aa9.56□□□□□ -0.88
SRO9YCL037C YMR1P47147 688 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
SRO9YCL037C YFR006WP43590 535 aa9.51□□□□□ -0.89
SRO9YCL037C DBP1P24784 617 aaKnown RBP9.5□□□□□ -0.89
SRO9YCL037C UBP9P39967 754 aa9.5□□□□□ -0.89
SRO9YCL037C BUD31P25337 157 aaPredicted RBP9.49□□□□□ -0.89
SRO9YCL037C GTT3P39996 337 aa9.48□□□□□ -0.89
SRO9YCL037C RAM2P29703 316 aa9.47□□□□□ -0.89
SRO9YCL037C STS1P38637 319 aa9.47□□□□□ -0.89
SRO9YCL037C YBL029C-AQ3E756 94 aa9.4□□□□□ -0.9
SRO9YCL037C WSC3Q12215 556 aa9.39□□□□□ -0.91
SRO9YCL037C MAK11P20484 414 aaKnown RBP9.37□□□□□ -0.91
SRO9YCL037C VMA1P17255 1071 aaKnown RBP9.34□□□□□ -0.91
SRO9YCL037C MIF2P35201 549 aa9.31□□□□□ -0.92
SRO9YCL037C DMA1P38823 416 aa9.3□□□□□ -0.92
SRO9YCL037C VNX1P42839 908 aa9.3□□□□□ -0.92
SRO9YCL037C COQ8P27697 501 aa9.26□□□□□ -0.93
SRO9YCL037C SPP1Q03012 353 aa9.26□□□□□ -0.93
SRO9YCL037C SET4P42948 560 aa9.25□□□□□ -0.93
SRO9YCL037C YOL036WQ08206 761 aa9.25□□□□□ -0.93
SRO9YCL037C RQC2Q12532 1038 aaKnown RBP9.24□□□□□ -0.93
SRO9YCL037C SAM3Q08986 587 aa9.22□□□□□ -0.93
SRO9YCL037C EDS1P38073 919 aa9.21□□□□□ -0.94
SRO9YCL037C MSB4Q12317 492 aa9.2□□□□□ -0.94
SRO9YCL037C TIF11P38912 153 aaKnown RBP9.19□□□□□ -0.94
SRO9YCL037C SET1P38827 1080 aaKnown RBP9.18□□□□□ -0.94
SRO9YCL037C GYP5Q12344 894 aa9.17□□□□□ -0.94
SRO9YCL037C PTC3P34221 468 aaKnown RBP9.16□□□□□ -0.94
SRO9YCL037C SIS1P25294 352 aaKnown RBP9.15□□□□□ -0.94
SRO9YCL037C EAP1P36041 632 aaKnown RBP9.14□□□□□ -0.95
SRO9YCL037C ULI1P43604 169 aa9.14□□□□□ -0.95
SRO9YCL037C GRE2Q12068 342 aaKnown RBP9.13□□□□□ -0.95
SRO9YCL037C ATH1P48016 1211 aa9.11□□□□□ -0.95
SRO9YCL037C ABP1P15891 592 aaKnown RBP9.1□□□□□ -0.95
SRO9YCL037C DCW1P36091 449 aa9.1□□□□□ -0.95
SRO9YCL037C TRP5P00931 707 aaKnown RBP9.08□□□□□ -0.96
SRO9YCL037C NOP53Q12080 455 aaKnown RBP9.07□□□□□ -0.96
SRO9YCL037C HTA1P04911 132 aaKnown RBP9.06□□□□□ -0.96
SRO9YCL037C HTA2P04912 132 aa9.06□□□□□ -0.96
SRO9YCL037C LDB19Q12502 818 aa9.06□□□□□ -0.96
SRO9YCL037C GUT1P32190 709 aa9.05□□□□□ -0.96
SRO9YCL037C IOC2Q12072 812 aa9.05□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms