RNA–Protein interactions for RNA: ENST00000641909.1

MTHFR-218, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 2,254 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-218ENST00000641909 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
MTHFR-218ENST00000641909 SHROOM4Q9ULL8 1493 aa26.66■■□□□ 1.86
MTHFR-218ENST00000641909 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
MTHFR-218ENST00000641909 ZCCHC6Q5VYS8 1495 aaKnown RBP26.48■■□□□ 1.83
MTHFR-218ENST00000641909 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
MTHFR-218ENST00000641909 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.72
MTHFR-218ENST00000641909 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
MTHFR-218ENST00000641909 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
MTHFR-218ENST00000641909 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
MTHFR-218ENST00000641909 ABCC9O60706 1549 aa25.01■■□□□ 1.59
MTHFR-218ENST00000641909 SCRIBQ14160 1630 aa24.93■■□□□ 1.58
MTHFR-218ENST00000641909 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
MTHFR-218ENST00000641909 HRCP23327 699 aa24.72■■□□□ 1.55
MTHFR-218ENST00000641909 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
MTHFR-218ENST00000641909 PCGF6Q9BYE7 350 aa24.66■■□□□ 1.54
MTHFR-218ENST00000641909 NACADO15069 1562 aa24.55■■□□□ 1.52
MTHFR-218ENST00000641909 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
MTHFR-218ENST00000641909 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
MTHFR-218ENST00000641909 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
MTHFR-218ENST00000641909 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
MTHFR-218ENST00000641909 PELP1Q8IZL8 1130 aaKnown RBP24.25■■□□□ 1.47
MTHFR-218ENST00000641909 WIZO95785 1651 aa24.21■■□□□ 1.47
MTHFR-218ENST00000641909 PPARGC1BQ86YN6 1023 aaKnown RBP24.21■■□□□ 1.47
MTHFR-218ENST00000641909 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
MTHFR-218ENST00000641909 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.46
MTHFR-218ENST00000641909 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
MTHFR-218ENST00000641909 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
MTHFR-218ENST00000641909 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
MTHFR-218ENST00000641909 UNC13AQ9UPW8 1703 aa23.84■■□□□ 1.41
MTHFR-218ENST00000641909 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
MTHFR-218ENST00000641909 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
MTHFR-218ENST00000641909 CCDC88BA6NC98 1476 aa23.7■■□□□ 1.39
MTHFR-218ENST00000641909 SMARCA2P51531 1590 aa23.7■■□□□ 1.38
MTHFR-218ENST00000641909 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
MTHFR-218ENST00000641909 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
MTHFR-218ENST00000641909 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
MTHFR-218ENST00000641909 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
MTHFR-218ENST00000641909 MYT1Q01538 1121 aa23.44■■□□□ 1.34
MTHFR-218ENST00000641909 SOGA1O94964 1423 aa23.44■■□□□ 1.34
MTHFR-218ENST00000641909 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
MTHFR-218ENST00000641909 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
MTHFR-218ENST00000641909 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
MTHFR-218ENST00000641909 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
MTHFR-218ENST00000641909 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
MTHFR-218ENST00000641909 EEA1Q15075 1411 aa23.31■■□□□ 1.32
MTHFR-218ENST00000641909 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
MTHFR-218ENST00000641909 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
MTHFR-218ENST00000641909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
MTHFR-218ENST00000641909 TTBK1Q5TCY1 1321 aaPredicted RBP23.19■■□□□ 1.3
MTHFR-218ENST00000641909 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
MTHFR-218ENST00000641909 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
MTHFR-218ENST00000641909 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
MTHFR-218ENST00000641909 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
MTHFR-218ENST00000641909 CCER1Q8TC90 406 aaPredicted RBP23.16■■□□□ 1.3
MTHFR-218ENST00000641909 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
MTHFR-218ENST00000641909 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
MTHFR-218ENST00000641909 KIF21BO75037 1637 aa23.03■■□□□ 1.28
MTHFR-218ENST00000641909 CLIP1P30622 1438 aa22.9■■□□□ 1.26
MTHFR-218ENST00000641909 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
MTHFR-218ENST00000641909 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
MTHFR-218ENST00000641909 ACIN1Q9UKV3 1341 aaKnown RBP22.83■■□□□ 1.25
MTHFR-218ENST00000641909 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
MTHFR-218ENST00000641909 BIVM-ERCC5R4GMW8 1640 aa22.8■■□□□ 1.24
MTHFR-218ENST00000641909 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
MTHFR-218ENST00000641909 DIEXFQ68CQ4 756 aaKnown RBP22.72■■□□□ 1.23
MTHFR-218ENST00000641909 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
MTHFR-218ENST00000641909 RANGAP1P46060 587 aaPredicted RBP22.7■■□□□ 1.22
MTHFR-218ENST00000641909 HNRNPUL2Q1KMD3 747 aaKnown RBP22.69■■□□□ 1.22
MTHFR-218ENST00000641909 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
MTHFR-218ENST00000641909 CUX1P39880 1505 aa22.65■■□□□ 1.22
MTHFR-218ENST00000641909 PRXQ9BXM0 1461 aa22.64■■□□□ 1.22
MTHFR-218ENST00000641909 NEUROD1Q13562 356 aa22.64■■□□□ 1.22
MTHFR-218ENST00000641909 APLP2Q06481 763 aa22.64■■□□□ 1.21
MTHFR-218ENST00000641909 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
MTHFR-218ENST00000641909 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
MTHFR-218ENST00000641909 GTF3C3Q9Y5Q9 886 aa22.55■■□□□ 1.2
MTHFR-218ENST00000641909 CFTRP13569 1480 aa22.55■■□□□ 1.2
MTHFR-218ENST00000641909 ZNF316A6NFI3 1004 aaPredicted RBP22.55■■□□□ 1.2
MTHFR-218ENST00000641909 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
MTHFR-218ENST00000641909 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
MTHFR-218ENST00000641909 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
MTHFR-218ENST00000641909 ARHGAP35Q9NRY4 1499 aa22.35■■□□□ 1.17
MTHFR-218ENST00000641909 CUX2O14529 1486 aa22.31■■□□□ 1.16
MTHFR-218ENST00000641909 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
MTHFR-218ENST00000641909 DHX57Q6P158 1386 aaKnown RBP22.29■■□□□ 1.16
MTHFR-218ENST00000641909 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
MTHFR-218ENST00000641909 IGF1RP08069 1367 aa22.26■■□□□ 1.15
MTHFR-218ENST00000641909 MIER1Q8N108 512 aa22.24■■□□□ 1.15
MTHFR-218ENST00000641909 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
MTHFR-218ENST00000641909 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
MTHFR-218ENST00000641909 YTHDC1Q96MU7 727 aaKnown RBP22.19■■□□□ 1.14
MTHFR-218ENST00000641909 CCNB3Q8WWL7 1395 aa22.18■■□□□ 1.14
MTHFR-218ENST00000641909 CARMIL1Q5VZK9 1371 aa22.16■■□□□ 1.14
MTHFR-218ENST00000641909 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
MTHFR-218ENST00000641909 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
MTHFR-218ENST00000641909 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.13
MTHFR-218ENST00000641909 MAP3K1Q13233 1512 aa22.07■■□□□ 1.12
MTHFR-218ENST00000641909 ITGAEP38570 1179 aa22.07■■□□□ 1.12
MTHFR-218ENST00000641909 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
MTHFR-218ENST00000641909 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms