RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 AEBP2Q6ZN18 517 aaPredicted RBP29.43■■■□□ 2.3
CASC19-248ENST00000641674 CHIC1Q5VXU3 224 aa27.63■■■□□ 2.01
CASC19-248ENST00000641674 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
CASC19-248ENST00000641674 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
CASC19-248ENST00000641674 FOXD1Q16676 465 aa23.44■■□□□ 1.34
CASC19-248ENST00000641674 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
CASC19-248ENST00000641674 MSH5O43196 834 aa21.91■■□□□ 1.1
CASC19-248ENST00000641674 POTEDQ86YR6 584 aa21.9■■□□□ 1.1
CASC19-248ENST00000641674 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
CASC19-248ENST00000641674 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
CASC19-248ENST00000641674 ADRA2BP18089 450 aa21.7■■□□□ 1.06
CASC19-248ENST00000641674 MAPK8IP2Q13387 824 aaPredicted RBP20.02■□□□□ 0.8
CASC19-248ENST00000641674 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.76
CASC19-248ENST00000641674 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
CASC19-248ENST00000641674 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
CASC19-248ENST00000641674 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
CASC19-248ENST00000641674 CACNB1Q02641 598 aaPredicted RBP19.02■□□□□ 0.64
CASC19-248ENST00000641674 HOXD11P31277 338 aaPredicted RBP18.99■□□□□ 0.63
CASC19-248ENST00000641674 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
CASC19-248ENST00000641674 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
CASC19-248ENST00000641674 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
CASC19-248ENST00000641674 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
CASC19-248ENST00000641674 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
CASC19-248ENST00000641674 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
CASC19-248ENST00000641674 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
CASC19-248ENST00000641674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
CASC19-248ENST00000641674 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
CASC19-248ENST00000641674 KCNA4P22459 653 aa17.66■□□□□ 0.42
CASC19-248ENST00000641674 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
CASC19-248ENST00000641674 CAPN15O75808 1086 aa17.53■□□□□ 0.4
CASC19-248ENST00000641674 DSG3P32926 999 aa17.48■□□□□ 0.39
CASC19-248ENST00000641674 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
CASC19-248ENST00000641674 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
CASC19-248ENST00000641674 ABCB7O75027 752 aa17.17■□□□□ 0.34
CASC19-248ENST00000641674 POTEHQ6S545 545 aa17.09■□□□□ 0.33
CASC19-248ENST00000641674 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
CASC19-248ENST00000641674 APLP2Q06481 763 aa17.06■□□□□ 0.32
CASC19-248ENST00000641674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
CASC19-248ENST00000641674 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
CASC19-248ENST00000641674 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
CASC19-248ENST00000641674 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.27
CASC19-248ENST00000641674 POLA2Q14181 598 aa16.68■□□□□ 0.26
CASC19-248ENST00000641674 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
CASC19-248ENST00000641674 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
CASC19-248ENST00000641674 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
CASC19-248ENST00000641674 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
CASC19-248ENST00000641674 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
CASC19-248ENST00000641674 ZBTB22O15209 634 aa16.27■□□□□ 0.2
CASC19-248ENST00000641674 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
CASC19-248ENST00000641674 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
CASC19-248ENST00000641674 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
CASC19-248ENST00000641674 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
CASC19-248ENST00000641674 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
CASC19-248ENST00000641674 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
CASC19-248ENST00000641674 ATXN8OSP0DMR3 200 aa15.93■□□□□ 0.14
CASC19-248ENST00000641674 SP7Q8TDD2 431 aaPredicted RBP15.89■□□□□ 0.13
CASC19-248ENST00000641674 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
CASC19-248ENST00000641674 FBLN2P98095 1184 aa15.76■□□□□ 0.11
CASC19-248ENST00000641674 HAX1O00165 279 aa15.75■□□□□ 0.11
CASC19-248ENST00000641674 SPDYE2BA6NHP3 402 aa15.74■□□□□ 0.11
CASC19-248ENST00000641674 SPDYE6P0CI01 402 aa15.74■□□□□ 0.11
CASC19-248ENST00000641674 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
CASC19-248ENST00000641674 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
CASC19-248ENST00000641674 EVX2Q03828 476 aa15.62■□□□□ 0.09
CASC19-248ENST00000641674 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
CASC19-248ENST00000641674 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
CASC19-248ENST00000641674 SSUH2Q9Y2M2 353 aa15.53■□□□□ 0.08
CASC19-248ENST00000641674 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.08
CASC19-248ENST00000641674 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
CASC19-248ENST00000641674 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
CASC19-248ENST00000641674 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
CASC19-248ENST00000641674 C19orf67A6NJJ6 358 aa15.33■□□□□ 0.04
CASC19-248ENST00000641674 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
CASC19-248ENST00000641674 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
CASC19-248ENST00000641674 GABBR2O75899 941 aa15.19■□□□□ 0.02
CASC19-248ENST00000641674 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
CASC19-248ENST00000641674 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
CASC19-248ENST00000641674 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
CASC19-248ENST00000641674 LHX8Q68G74 356 aa14.92□□□□□ -0.02
CASC19-248ENST00000641674 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
CASC19-248ENST00000641674 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
CASC19-248ENST00000641674 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
CASC19-248ENST00000641674 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
CASC19-248ENST00000641674 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.04
CASC19-248ENST00000641674 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
CASC19-248ENST00000641674 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
CASC19-248ENST00000641674 CLCN6P51797 869 aa14.69□□□□□ -0.06
CASC19-248ENST00000641674 GALR2O43603 387 aaPredicted RBP14.65□□□□□ -0.06
CASC19-248ENST00000641674 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
CASC19-248ENST00000641674 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
CASC19-248ENST00000641674 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.08
CASC19-248ENST00000641674 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
CASC19-248ENST00000641674 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
CASC19-248ENST00000641674 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
CASC19-248ENST00000641674 PROM2Q8N271 834 aa14.38□□□□□ -0.11
CASC19-248ENST00000641674 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
CASC19-248ENST00000641674 MS4A3Q96HJ5 214 aa14.36□□□□□ -0.11
CASC19-248ENST00000641674 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
CASC19-248ENST00000641674 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
CASC19-248ENST00000641674 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms