RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-222ENST00000641321 AEBP2Q6ZN18 517 aaPredicted RBP31.4■■■□□ 2.62
CASC19-222ENST00000641321 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
CASC19-222ENST00000641321 SENP3Q9H4L4 574 aaPredicted RBP26.81■■□□□ 1.88
CASC19-222ENST00000641321 PHF23Q9BUL5 403 aaPredicted RBP26.44■■□□□ 1.82
CASC19-222ENST00000641321 FOXD1Q16676 465 aa24.99■■□□□ 1.59
CASC19-222ENST00000641321 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
CASC19-222ENST00000641321 MSH5O43196 834 aa23.43■■□□□ 1.34
CASC19-222ENST00000641321 PPP6R1Q9UPN7 881 aa23.3■■□□□ 1.32
CASC19-222ENST00000641321 PIAS4Q8N2W9 510 aaPredicted RBP23.29■■□□□ 1.32
CASC19-222ENST00000641321 ADRA2BP18089 450 aa23.18■■□□□ 1.3
CASC19-222ENST00000641321 POTEDQ86YR6 584 aa23.01■■□□□ 1.27
CASC19-222ENST00000641321 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1.01
CASC19-222ENST00000641321 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
CASC19-222ENST00000641321 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
CASC19-222ENST00000641321 PPP4R3CPQ6ZMV5 832 aa20.77■□□□□ 0.92
CASC19-222ENST00000641321 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
CASC19-222ENST00000641321 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
CASC19-222ENST00000641321 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
CASC19-222ENST00000641321 RNF216Q9NWF9 866 aaPredicted RBP20.26■□□□□ 0.83
CASC19-222ENST00000641321 CACNB1Q02641 598 aaPredicted RBP20.12■□□□□ 0.81
CASC19-222ENST00000641321 RNF39Q9H2S5 420 aa20■□□□□ 0.79
CASC19-222ENST00000641321 NCBP3Q53F19 620 aaKnown RBP19.94■□□□□ 0.78
CASC19-222ENST00000641321 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
CASC19-222ENST00000641321 C1QBPQ07021 282 aaKnown RBP19.71■□□□□ 0.75
CASC19-222ENST00000641321 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
CASC19-222ENST00000641321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.7
CASC19-222ENST00000641321 KCNA4P22459 653 aa19.17■□□□□ 0.66
CASC19-222ENST00000641321 U3KPZ7 1027 aaPredicted RBP19.03■□□□□ 0.64
CASC19-222ENST00000641321 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
CASC19-222ENST00000641321 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
CASC19-222ENST00000641321 CAPN15O75808 1086 aa18.71■□□□□ 0.59
CASC19-222ENST00000641321 DSG3P32926 999 aa18.68■□□□□ 0.58
CASC19-222ENST00000641321 APLP2Q06481 763 aa18.58■□□□□ 0.56
CASC19-222ENST00000641321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
CASC19-222ENST00000641321 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
CASC19-222ENST00000641321 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
CASC19-222ENST00000641321 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
CASC19-222ENST00000641321 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
CASC19-222ENST00000641321 ABCB7O75027 752 aa18.25■□□□□ 0.51
CASC19-222ENST00000641321 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
CASC19-222ENST00000641321 SLC4A1APQ9BWU0 796 aaKnown RBP18.08■□□□□ 0.48
CASC19-222ENST00000641321 POTEHQ6S545 545 aa18.01■□□□□ 0.47
CASC19-222ENST00000641321 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
CASC19-222ENST00000641321 POLA2Q14181 598 aa17.9■□□□□ 0.46
CASC19-222ENST00000641321 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
CASC19-222ENST00000641321 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
CASC19-222ENST00000641321 ZBTB22O15209 634 aa17.64■□□□□ 0.41
CASC19-222ENST00000641321 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
CASC19-222ENST00000641321 CHRDL2Q6WN34 429 aa17.46■□□□□ 0.39
CASC19-222ENST00000641321 ATXN8OSP0DMR3 200 aa17.44■□□□□ 0.38
CASC19-222ENST00000641321 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
CASC19-222ENST00000641321 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
CASC19-222ENST00000641321 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
CASC19-222ENST00000641321 FBLN2P98095 1184 aa17.08■□□□□ 0.32
CASC19-222ENST00000641321 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
CASC19-222ENST00000641321 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
CASC19-222ENST00000641321 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
CASC19-222ENST00000641321 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
CASC19-222ENST00000641321 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
CASC19-222ENST00000641321 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
CASC19-222ENST00000641321 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
CASC19-222ENST00000641321 SP7Q8TDD2 431 aaPredicted RBP16.84■□□□□ 0.29
CASC19-222ENST00000641321 SSUH2Q9Y2M2 353 aa16.79■□□□□ 0.28
CASC19-222ENST00000641321 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.28
CASC19-222ENST00000641321 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
CASC19-222ENST00000641321 SPDYE1Q8NFV5 336 aaPredicted RBP16.73■□□□□ 0.27
CASC19-222ENST00000641321 HAX1O00165 279 aa16.71■□□□□ 0.27
CASC19-222ENST00000641321 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
CASC19-222ENST00000641321 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
CASC19-222ENST00000641321 EVX2Q03828 476 aa16.52■□□□□ 0.24
CASC19-222ENST00000641321 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
CASC19-222ENST00000641321 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
CASC19-222ENST00000641321 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
CASC19-222ENST00000641321 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
CASC19-222ENST00000641321 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
CASC19-222ENST00000641321 GABBR2O75899 941 aa16.16■□□□□ 0.18
CASC19-222ENST00000641321 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
CASC19-222ENST00000641321 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
CASC19-222ENST00000641321 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
CASC19-222ENST00000641321 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
CASC19-222ENST00000641321 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
CASC19-222ENST00000641321 CLCN6P51797 869 aa15.94■□□□□ 0.14
CASC19-222ENST00000641321 ZNF579Q8NAF0 562 aaKnown RBP15.83■□□□□ 0.12
CASC19-222ENST00000641321 POTEIP0CG38 1075 aa15.82■□□□□ 0.12
CASC19-222ENST00000641321 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
CASC19-222ENST00000641321 LHX8Q68G74 356 aa15.79■□□□□ 0.12
CASC19-222ENST00000641321 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
CASC19-222ENST00000641321 PROM2Q8N271 834 aa15.75■□□□□ 0.11
CASC19-222ENST00000641321 MNX1P50219 401 aaPredicted RBP15.73■□□□□ 0.11
CASC19-222ENST00000641321 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
CASC19-222ENST00000641321 DCBLD2Q96PD2 775 aa15.69■□□□□ 0.1
CASC19-222ENST00000641321 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
CASC19-222ENST00000641321 PHF12Q96QT6 1004 aa15.56■□□□□ 0.08
CASC19-222ENST00000641321 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
CASC19-222ENST00000641321 MS4A3Q96HJ5 214 aa15.37■□□□□ 0.05
CASC19-222ENST00000641321 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
CASC19-222ENST00000641321 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
CASC19-222ENST00000641321 MIER1Q8N108 512 aa15.34■□□□□ 0.05
CASC19-222ENST00000641321 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
CASC19-222ENST00000641321 ASTLQ6HA08 431 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms