RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
MACF1-235ENST00000641104 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
MACF1-235ENST00000641104 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.73
MACF1-235ENST00000641104 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.68
MACF1-235ENST00000641104 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
MACF1-235ENST00000641104 APLP2Q06481 763 aa18.88■□□□□ 0.61
MACF1-235ENST00000641104 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
MACF1-235ENST00000641104 FAM9AQ8IZU1 332 aaPredicted RBP18.66■□□□□ 0.58
MACF1-235ENST00000641104 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
MACF1-235ENST00000641104 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
MACF1-235ENST00000641104 TRIM41Q8WV44 630 aa18.27■□□□□ 0.52
MACF1-235ENST00000641104 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
MACF1-235ENST00000641104 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
MACF1-235ENST00000641104 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
MACF1-235ENST00000641104 CCER1Q8TC90 406 aaPredicted RBP18.12■□□□□ 0.49
MACF1-235ENST00000641104 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
MACF1-235ENST00000641104 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
MACF1-235ENST00000641104 ERICH6Q7L0X2 663 aa17.99■□□□□ 0.47
MACF1-235ENST00000641104 NEFLP07196 543 aa17.8■□□□□ 0.44
MACF1-235ENST00000641104 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
MACF1-235ENST00000641104 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
MACF1-235ENST00000641104 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
MACF1-235ENST00000641104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
MACF1-235ENST00000641104 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
MACF1-235ENST00000641104 MYT1LQ9UL68 1186 aa17.54■□□□□ 0.4
MACF1-235ENST00000641104 ITGAEP38570 1179 aa17.49■□□□□ 0.39
MACF1-235ENST00000641104 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
MACF1-235ENST00000641104 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
MACF1-235ENST00000641104 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
MACF1-235ENST00000641104 HRCP23327 699 aa17.33■□□□□ 0.36
MACF1-235ENST00000641104 MYT1Q01538 1121 aa17.31■□□□□ 0.36
MACF1-235ENST00000641104 DAXXQ9UER7 740 aaPredicted RBP17.3■□□□□ 0.36
MACF1-235ENST00000641104 CNGB1Q14028 1251 aaPredicted RBP17.17■□□□□ 0.34
MACF1-235ENST00000641104 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
MACF1-235ENST00000641104 ABCC9O60706 1549 aa17.09■□□□□ 0.33
MACF1-235ENST00000641104 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.33
MACF1-235ENST00000641104 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
MACF1-235ENST00000641104 TRIM52Q96A61 297 aa17.02■□□□□ 0.31
MACF1-235ENST00000641104 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
MACF1-235ENST00000641104 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
MACF1-235ENST00000641104 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
MACF1-235ENST00000641104 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
MACF1-235ENST00000641104 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
MACF1-235ENST00000641104 FBLN2P98095 1184 aa16.81■□□□□ 0.28
MACF1-235ENST00000641104 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
MACF1-235ENST00000641104 ANP32CO43423 234 aa16.77■□□□□ 0.28
MACF1-235ENST00000641104 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
MACF1-235ENST00000641104 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
MACF1-235ENST00000641104 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
MACF1-235ENST00000641104 BCANQ96GW7 911 aa16.61■□□□□ 0.25
MACF1-235ENST00000641104 NEFMP07197 916 aa16.59■□□□□ 0.25
MACF1-235ENST00000641104 CDK11AQ9UQ88 783 aaPredicted RBP16.59■□□□□ 0.25
MACF1-235ENST00000641104 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
MACF1-235ENST00000641104 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
MACF1-235ENST00000641104 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
MACF1-235ENST00000641104 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
MACF1-235ENST00000641104 SLC24A1O60721 1099 aa16.53■□□□□ 0.24
MACF1-235ENST00000641104 ESF1Q9H501 851 aaKnown RBP16.43■□□□□ 0.22
MACF1-235ENST00000641104 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
MACF1-235ENST00000641104 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
MACF1-235ENST00000641104 TONSLQ96HA7 1378 aa16.37■□□□□ 0.21
MACF1-235ENST00000641104 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
MACF1-235ENST00000641104 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
MACF1-235ENST00000641104 CHGAP10645 457 aaKnown RBP16.33■□□□□ 0.2
MACF1-235ENST00000641104 ANP32AP39687 249 aaKnown RBP16.32■□□□□ 0.2
MACF1-235ENST00000641104 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
MACF1-235ENST00000641104 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
MACF1-235ENST00000641104 NPM2Q86SE8 214 aaKnown RBP16.2■□□□□ 0.18
MACF1-235ENST00000641104 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
MACF1-235ENST00000641104 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
MACF1-235ENST00000641104 TSPY4P0CV99 314 aa16.18■□□□□ 0.18
MACF1-235ENST00000641104 TSPY10P0CW01 314 aa16.18■□□□□ 0.18
MACF1-235ENST00000641104 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
MACF1-235ENST00000641104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
MACF1-235ENST00000641104 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
MACF1-235ENST00000641104 FKBP8Q14318 412 aa16.17■□□□□ 0.18
MACF1-235ENST00000641104 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
MACF1-235ENST00000641104 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
MACF1-235ENST00000641104 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
MACF1-235ENST00000641104 HSP90AA1P07900 732 aaKnown RBP16.14■□□□□ 0.17
MACF1-235ENST00000641104 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
MACF1-235ENST00000641104 TMC1Q8TDI8 760 aa16.13■□□□□ 0.17
MACF1-235ENST00000641104 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
MACF1-235ENST00000641104 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
MACF1-235ENST00000641104 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
MACF1-235ENST00000641104 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.17
MACF1-235ENST00000641104 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.17
MACF1-235ENST00000641104 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
MACF1-235ENST00000641104 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
MACF1-235ENST00000641104 CLIP1P30622 1438 aa16.03■□□□□ 0.16
MACF1-235ENST00000641104 MRS2Q9HD23 443 aa16.03■□□□□ 0.16
MACF1-235ENST00000641104 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
MACF1-235ENST00000641104 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
MACF1-235ENST00000641104 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
MACF1-235ENST00000641104 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
MACF1-235ENST00000641104 RRP7BPQ9NSQ0 103 aa15.94■□□□□ 0.14
MACF1-235ENST00000641104 EEA1Q15075 1411 aa15.94■□□□□ 0.14
MACF1-235ENST00000641104 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
MACF1-235ENST00000641104 MYH16Q9H6N6 1097 aa15.91■□□□□ 0.14
MACF1-235ENST00000641104 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms