RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
ATM-230ENST00000640388 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
ATM-230ENST00000640388 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
ATM-230ENST00000640388 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
ATM-230ENST00000640388 FOXD1Q16676 465 aa15.44■□□□□ 0.06
ATM-230ENST00000640388 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
ATM-230ENST00000640388 MSH5O43196 834 aa14.51□□□□□ -0.09
ATM-230ENST00000640388 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
ATM-230ENST00000640388 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
ATM-230ENST00000640388 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
ATM-230ENST00000640388 ADRA2BP18089 450 aa14.31□□□□□ -0.12
ATM-230ENST00000640388 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
ATM-230ENST00000640388 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
ATM-230ENST00000640388 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
ATM-230ENST00000640388 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
ATM-230ENST00000640388 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
ATM-230ENST00000640388 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
ATM-230ENST00000640388 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
ATM-230ENST00000640388 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
ATM-230ENST00000640388 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
ATM-230ENST00000640388 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
ATM-230ENST00000640388 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
ATM-230ENST00000640388 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
ATM-230ENST00000640388 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
ATM-230ENST00000640388 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
ATM-230ENST00000640388 KCNA4P22459 653 aa12.1□□□□□ -0.47
ATM-230ENST00000640388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.499e-10■■□□□ 12.4
ATM-230ENST00000640388 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
ATM-230ENST00000640388 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
ATM-230ENST00000640388 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
ATM-230ENST00000640388 DSG3P32926 999 aa11.55□□□□□ -0.56
ATM-230ENST00000640388 CAPN15O75808 1086 aa11.54□□□□□ -0.56
ATM-230ENST00000640388 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.57
ATM-230ENST00000640388 APLP2Q06481 763 aa11.51□□□□□ -0.57
ATM-230ENST00000640388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
ATM-230ENST00000640388 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
ATM-230ENST00000640388 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
ATM-230ENST00000640388 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
ATM-230ENST00000640388 TRHP20396 242 aaPredicted RBP11.33□□□□□ -0.6
ATM-230ENST00000640388 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
ATM-230ENST00000640388 ABCB7O75027 752 aa11.25□□□□□ -0.61
ATM-230ENST00000640388 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
ATM-230ENST00000640388 POTEHQ6S545 545 aa11.18□□□□□ -0.62
ATM-230ENST00000640388 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
ATM-230ENST00000640388 ZBTB22O15209 634 aa11.13□□□□□ -0.63
ATM-230ENST00000640388 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
ATM-230ENST00000640388 POLA2Q14181 598 aa11.05□□□□□ -0.64
ATM-230ENST00000640388 CSRNP3Q8WYN3 585 aa11.05□□□□□ -0.64
ATM-230ENST00000640388 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
ATM-230ENST00000640388 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
ATM-230ENST00000640388 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
ATM-230ENST00000640388 AKT1S1Q96B36 256 aa10.8□□□□□ -0.68
ATM-230ENST00000640388 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
ATM-230ENST00000640388 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
ATM-230ENST00000640388 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
ATM-230ENST00000640388 FBLN2P98095 1184 aa10.6□□□□□ -0.71
ATM-230ENST00000640388 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
ATM-230ENST00000640388 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
ATM-230ENST00000640388 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
ATM-230ENST00000640388 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
ATM-230ENST00000640388 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
ATM-230ENST00000640388 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
ATM-230ENST00000640388 FXR2P51116 673 aaKnown RBP eCLIP10.49□□□□□ -0.73
ATM-230ENST00000640388 SSUH2Q9Y2M2 353 aa10.45□□□□□ -0.74
ATM-230ENST00000640388 SP7Q8TDD2 431 aaPredicted RBP10.39□□□□□ -0.75
ATM-230ENST00000640388 SPDYE1Q8NFV5 336 aaPredicted RBP10.38□□□□□ -0.75
ATM-230ENST00000640388 ZNF692Q9BU19 519 aaPredicted RBP10.36□□□□□ -0.75
ATM-230ENST00000640388 HAX1O00165 279 aa10.27□□□□□ -0.77
ATM-230ENST00000640388 CLEC11AQ9Y240 323 aa10.25□□□□□ -0.77
ATM-230ENST00000640388 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
ATM-230ENST00000640388 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
ATM-230ENST00000640388 EVX2Q03828 476 aa10.16□□□□□ -0.78
ATM-230ENST00000640388 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
ATM-230ENST00000640388 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
ATM-230ENST00000640388 CHADLQ6NUI6 762 aa10.07□□□□□ -0.8
ATM-230ENST00000640388 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
ATM-230ENST00000640388 FKBP8Q14318 412 aa10□□□□□ -0.81
ATM-230ENST00000640388 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
ATM-230ENST00000640388 FARP1Q9Y4F1 1045 aaPredicted RBP9.98□□□□□ -0.81
ATM-230ENST00000640388 GABBR2O75899 941 aa9.96□□□□□ -0.82
ATM-230ENST00000640388 CD44P16070 742 aaKnown RBP9.92□□□□□ -0.82
ATM-230ENST00000640388 CLCN6P51797 869 aa9.92□□□□□ -0.82
ATM-230ENST00000640388 CREBZFQ9NS37 354 aa9.91□□□□□ -0.82
ATM-230ENST00000640388 PROM2Q8N271 834 aa9.86□□□□□ -0.83
ATM-230ENST00000640388 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
ATM-230ENST00000640388 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
ATM-230ENST00000640388 POTEIP0CG38 1075 aa9.76□□□□□ -0.85
ATM-230ENST00000640388 ZRANB1Q9UGI0 708 aa9.75□□□□□ -0.85
ATM-230ENST00000640388 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
ATM-230ENST00000640388 LHX8Q68G74 356 aa9.72□□□□□ -0.85
ATM-230ENST00000640388 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
ATM-230ENST00000640388 DCBLD2Q96PD2 775 aa9.66□□□□□ -0.86
ATM-230ENST00000640388 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
ATM-230ENST00000640388 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
ATM-230ENST00000640388 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
ATM-230ENST00000640388 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
ATM-230ENST00000640388 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
ATM-230ENST00000640388 CCDC61Q9Y6R9 512 aa9.53□□□□□ -0.88
ATM-230ENST00000640388 MIER1Q8N108 512 aa9.52□□□□□ -0.89
ATM-230ENST00000640388 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms