RNA–Protein interactions for RNA: ENST00000640353.1

KCNMA1-281, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-281ENST00000640353 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
KCNMA1-281ENST00000640353 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
KCNMA1-281ENST00000640353 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
KCNMA1-281ENST00000640353 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
KCNMA1-281ENST00000640353 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.84
KCNMA1-281ENST00000640353 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
KCNMA1-281ENST00000640353 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
KCNMA1-281ENST00000640353 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
KCNMA1-281ENST00000640353 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
KCNMA1-281ENST00000640353 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
KCNMA1-281ENST00000640353 ABCC9O60706 1549 aa19.28■□□□□ 0.68
KCNMA1-281ENST00000640353 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
KCNMA1-281ENST00000640353 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
KCNMA1-281ENST00000640353 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
KCNMA1-281ENST00000640353 NACADO15069 1562 aa19.06■□□□□ 0.64
KCNMA1-281ENST00000640353 HRCP23327 699 aa19.03■□□□□ 0.64
KCNMA1-281ENST00000640353 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
KCNMA1-281ENST00000640353 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
KCNMA1-281ENST00000640353 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
KCNMA1-281ENST00000640353 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
KCNMA1-281ENST00000640353 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
KCNMA1-281ENST00000640353 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
KCNMA1-281ENST00000640353 WIZO95785 1651 aa18.71■□□□□ 0.59
KCNMA1-281ENST00000640353 PPARGC1BQ86YN6 1023 aaKnown RBP18.65■□□□□ 0.58
KCNMA1-281ENST00000640353 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
KCNMA1-281ENST00000640353 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
KCNMA1-281ENST00000640353 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
KCNMA1-281ENST00000640353 TOP2AP11388 1531 aaKnown RBP18.42■□□□□ 0.54
KCNMA1-281ENST00000640353 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
KCNMA1-281ENST00000640353 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
KCNMA1-281ENST00000640353 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
KCNMA1-281ENST00000640353 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
KCNMA1-281ENST00000640353 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
KCNMA1-281ENST00000640353 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
KCNMA1-281ENST00000640353 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
KCNMA1-281ENST00000640353 BICRAQ9NZM4 1560 aa18.22■□□□□ 0.51
KCNMA1-281ENST00000640353 SOGA1O94964 1423 aa18.15■□□□□ 0.5
KCNMA1-281ENST00000640353 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
KCNMA1-281ENST00000640353 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
KCNMA1-281ENST00000640353 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
KCNMA1-281ENST00000640353 EEA1Q15075 1411 aa18.05■□□□□ 0.48
KCNMA1-281ENST00000640353 CEP162Q5TB80 1403 aa18.05■□□□□ 0.48
KCNMA1-281ENST00000640353 RUSC2Q8N2Y8 1516 aa18.05■□□□□ 0.48
KCNMA1-281ENST00000640353 TTBK1Q5TCY1 1321 aaPredicted RBP18.04■□□□□ 0.48
KCNMA1-281ENST00000640353 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
KCNMA1-281ENST00000640353 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
KCNMA1-281ENST00000640353 ATAD2BQ9ULI0 1458 aa18■□□□□ 0.47
KCNMA1-281ENST00000640353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
KCNMA1-281ENST00000640353 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
KCNMA1-281ENST00000640353 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
KCNMA1-281ENST00000640353 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
KCNMA1-281ENST00000640353 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
KCNMA1-281ENST00000640353 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.45
KCNMA1-281ENST00000640353 KIF21BO75037 1637 aa17.75■□□□□ 0.43
KCNMA1-281ENST00000640353 CLIP1P30622 1438 aa17.75■□□□□ 0.43
KCNMA1-281ENST00000640353 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
KCNMA1-281ENST00000640353 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
KCNMA1-281ENST00000640353 APLP2Q06481 763 aa17.68■□□□□ 0.42
KCNMA1-281ENST00000640353 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
KCNMA1-281ENST00000640353 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
KCNMA1-281ENST00000640353 VPS8Q8N3P4 1428 aa17.65■□□□□ 0.42
KCNMA1-281ENST00000640353 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
KCNMA1-281ENST00000640353 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
KCNMA1-281ENST00000640353 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.4
KCNMA1-281ENST00000640353 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
KCNMA1-281ENST00000640353 CUX1P39880 1505 aa17.53■□□□□ 0.4
KCNMA1-281ENST00000640353 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
KCNMA1-281ENST00000640353 CFTRP13569 1480 aa17.51■□□□□ 0.39
KCNMA1-281ENST00000640353 KIF27Q86VH2 1401 aa17.49■□□□□ 0.39
KCNMA1-281ENST00000640353 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
KCNMA1-281ENST00000640353 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
KCNMA1-281ENST00000640353 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
KCNMA1-281ENST00000640353 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
KCNMA1-281ENST00000640353 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-281ENST00000640353 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-281ENST00000640353 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
KCNMA1-281ENST00000640353 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
KCNMA1-281ENST00000640353 CUX2O14529 1486 aa17.33■□□□□ 0.36
KCNMA1-281ENST00000640353 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.36
KCNMA1-281ENST00000640353 IGF1RP08069 1367 aa17.3■□□□□ 0.36
KCNMA1-281ENST00000640353 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
KCNMA1-281ENST00000640353 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
KCNMA1-281ENST00000640353 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
KCNMA1-281ENST00000640353 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
KCNMA1-281ENST00000640353 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
KCNMA1-281ENST00000640353 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
KCNMA1-281ENST00000640353 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
KCNMA1-281ENST00000640353 CLSPNQ9HAW4 1339 aa17.21■□□□□ 0.35
KCNMA1-281ENST00000640353 ITGAEP38570 1179 aa17.2■□□□□ 0.34
KCNMA1-281ENST00000640353 MIER1Q8N108 512 aa17.19■□□□□ 0.34
KCNMA1-281ENST00000640353 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
KCNMA1-281ENST00000640353 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
KCNMA1-281ENST00000640353 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
KCNMA1-281ENST00000640353 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
KCNMA1-281ENST00000640353 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
KCNMA1-281ENST00000640353 P3H3Q8IVL6 736 aa17.13■□□□□ 0.33
KCNMA1-281ENST00000640353 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
KCNMA1-281ENST00000640353 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
KCNMA1-281ENST00000640353 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
KCNMA1-281ENST00000640353 NESP48681 1621 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms