RNA–Protein interactions for RNA: ENST00000640003.1

AL391117.1-201, humanhuman

TSL 5 BASIC

Gene AL391117.1, Length 1,186 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL391117.1-201ENST00000640003 AEBP2Q6ZN18 517 aaPredicted RBP34.02■■■■□ 3.04
AL391117.1-201ENST00000640003 CHIC1Q5VXU3 224 aa32.07■■■□□ 2.72
AL391117.1-201ENST00000640003 SENP3Q9H4L4 574 aaPredicted RBP29.11■■■□□ 2.25
AL391117.1-201ENST00000640003 PHF23Q9BUL5 403 aaPredicted RBP28.64■■■□□ 2.18
AL391117.1-201ENST00000640003 FOXD1Q16676 465 aa27.12■■□□□ 1.93
AL391117.1-201ENST00000640003 MSH5O43196 834 aa25.54■■□□□ 1.68
AL391117.1-201ENST00000640003 PLPPR3Q6T4P5 718 aa25.5■■□□□ 1.67
AL391117.1-201ENST00000640003 POTEDQ86YR6 584 aa25.36■■□□□ 1.65
AL391117.1-201ENST00000640003 PIAS4Q8N2W9 510 aaPredicted RBP25.28■■□□□ 1.64
AL391117.1-201ENST00000640003 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
AL391117.1-201ENST00000640003 ADRA2BP18089 450 aa25.01■■□□□ 1.59
AL391117.1-201ENST00000640003 MAPK8IP2Q13387 824 aaPredicted RBP23.04■■□□□ 1.28
AL391117.1-201ENST00000640003 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
AL391117.1-201ENST00000640003 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
AL391117.1-201ENST00000640003 PPP4R3CPQ6ZMV5 832 aa22.29■■□□□ 1.16
AL391117.1-201ENST00000640003 HOXD11P31277 338 aaPredicted RBP22.09■■□□□ 1.13
AL391117.1-201ENST00000640003 CACNB1Q02641 598 aaPredicted RBP22.02■■□□□ 1.12
AL391117.1-201ENST00000640003 DCAF8L1A6NGE4 600 aa22.01■■□□□ 1.11
AL391117.1-201ENST00000640003 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
AL391117.1-201ENST00000640003 RNF216Q9NWF9 866 aaPredicted RBP21.84■■□□□ 1.09
AL391117.1-201ENST00000640003 RNF39Q9H2S5 420 aa21.75■■□□□ 1.07
AL391117.1-201ENST00000640003 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
AL391117.1-201ENST00000640003 C1QBPQ07021 282 aaKnown RBP21.43■■□□□ 1.02
AL391117.1-201ENST00000640003 NCBP3Q53F19 620 aaKnown RBP21.36■■□□□ 1.01
AL391117.1-201ENST00000640003 NPM3O75607 178 aaKnown RBP21.05■□□□□ 0.96
AL391117.1-201ENST00000640003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.95
AL391117.1-201ENST00000640003 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
AL391117.1-201ENST00000640003 KCNA4P22459 653 aa20.37■□□□□ 0.85
AL391117.1-201ENST00000640003 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
AL391117.1-201ENST00000640003 CAPN15O75808 1086 aa20.27■□□□□ 0.84
AL391117.1-201ENST00000640003 DSG3P32926 999 aa20.26■□□□□ 0.83
AL391117.1-201ENST00000640003 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
AL391117.1-201ENST00000640003 APLP2Q06481 763 aa19.98■□□□□ 0.79
AL391117.1-201ENST00000640003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.9■□□□□ 0.78
AL391117.1-201ENST00000640003 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
AL391117.1-201ENST00000640003 ZNF219Q9P2Y4 722 aaPredicted RBP19.89■□□□□ 0.77
AL391117.1-201ENST00000640003 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
AL391117.1-201ENST00000640003 POTEHQ6S545 545 aa19.82■□□□□ 0.76
AL391117.1-201ENST00000640003 ABCB7O75027 752 aa19.77■□□□□ 0.76
AL391117.1-201ENST00000640003 SAMD1Q6SPF0 538 aaPredicted RBP19.76■□□□□ 0.75
AL391117.1-201ENST00000640003 MYCNP04198 464 aaPredicted RBP19.5■□□□□ 0.71
AL391117.1-201ENST00000640003 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
AL391117.1-201ENST00000640003 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
AL391117.1-201ENST00000640003 POLA2Q14181 598 aa19.29■□□□□ 0.68
AL391117.1-201ENST00000640003 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
AL391117.1-201ENST00000640003 FOXD4L1Q9NU39 408 aa19.14■□□□□ 0.65
AL391117.1-201ENST00000640003 CHRDL2Q6WN34 429 aa19.02■□□□□ 0.64
AL391117.1-201ENST00000640003 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
AL391117.1-201ENST00000640003 ZBTB12Q9Y330 459 aaPredicted RBP18.95■□□□□ 0.62
AL391117.1-201ENST00000640003 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
AL391117.1-201ENST00000640003 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
AL391117.1-201ENST00000640003 ZBTB22O15209 634 aa18.73■□□□□ 0.59
AL391117.1-201ENST00000640003 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
AL391117.1-201ENST00000640003 REM2Q8IYK8 340 aaPredicted RBP18.65■□□□□ 0.58
AL391117.1-201ENST00000640003 ATXN8OSP0DMR3 200 aa18.6■□□□□ 0.57
AL391117.1-201ENST00000640003 PIP4P2Q8N4L2 257 aa18.51■□□□□ 0.55
AL391117.1-201ENST00000640003 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
AL391117.1-201ENST00000640003 SP7Q8TDD2 431 aaPredicted RBP18.46■□□□□ 0.55
AL391117.1-201ENST00000640003 FXR2P51116 673 aaKnown RBP eCLIP18.38■□□□□ 0.53
AL391117.1-201ENST00000640003 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.52
AL391117.1-201ENST00000640003 SPDYE6P0CI01 402 aa18.33■□□□□ 0.52
AL391117.1-201ENST00000640003 SPDYE2Q495Y8 402 aa18.33■□□□□ 0.52
AL391117.1-201ENST00000640003 FBLN2P98095 1184 aa18.32■□□□□ 0.52
AL391117.1-201ENST00000640003 HAX1O00165 279 aa18.21■□□□□ 0.51
AL391117.1-201ENST00000640003 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
AL391117.1-201ENST00000640003 SPDYE1Q8NFV5 336 aaPredicted RBP18.06■□□□□ 0.48
AL391117.1-201ENST00000640003 SSUH2Q9Y2M2 353 aa18.06■□□□□ 0.48
AL391117.1-201ENST00000640003 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
AL391117.1-201ENST00000640003 CLEC11AQ9Y240 323 aa17.98■□□□□ 0.47
AL391117.1-201ENST00000640003 PRKAR2AP13861 404 aaKnown RBP17.97■□□□□ 0.47
AL391117.1-201ENST00000640003 EVX2Q03828 476 aa17.96■□□□□ 0.47
AL391117.1-201ENST00000640003 C19orf67A6NJJ6 358 aa17.79■□□□□ 0.44
AL391117.1-201ENST00000640003 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
AL391117.1-201ENST00000640003 PRR29P0C7W0 189 aa17.67■□□□□ 0.42
AL391117.1-201ENST00000640003 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
AL391117.1-201ENST00000640003 GABBR2O75899 941 aa17.57■□□□□ 0.4
AL391117.1-201ENST00000640003 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
AL391117.1-201ENST00000640003 CD44P16070 742 aaKnown RBP17.38■□□□□ 0.37
AL391117.1-201ENST00000640003 CLCN6P51797 869 aa17.28■□□□□ 0.36
AL391117.1-201ENST00000640003 LHX8Q68G74 356 aa17.28■□□□□ 0.36
AL391117.1-201ENST00000640003 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
AL391117.1-201ENST00000640003 POTEIP0CG38 1075 aa17.2■□□□□ 0.34
AL391117.1-201ENST00000640003 CREBZFQ9NS37 354 aa17.19■□□□□ 0.34
AL391117.1-201ENST00000640003 ZNF579Q8NAF0 562 aaKnown RBP17.15■□□□□ 0.34
AL391117.1-201ENST00000640003 SPDYE4A6NLX3 237 aa17.14■□□□□ 0.33
AL391117.1-201ENST00000640003 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
AL391117.1-201ENST00000640003 DCBLD2Q96PD2 775 aa17.03■□□□□ 0.32
AL391117.1-201ENST00000640003 FKBP8Q14318 412 aa16.99■□□□□ 0.31
AL391117.1-201ENST00000640003 GALR2O43603 387 aaPredicted RBP16.91■□□□□ 0.3
AL391117.1-201ENST00000640003 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
AL391117.1-201ENST00000640003 MNX1P50219 401 aaPredicted RBP16.88■□□□□ 0.29
AL391117.1-201ENST00000640003 NPM1P06748 294 aaKnown RBP eCLIP16.87■□□□□ 0.29
AL391117.1-201ENST00000640003 PHF12Q96QT6 1004 aa16.81■□□□□ 0.28
AL391117.1-201ENST00000640003 PROM2Q8N271 834 aa16.76■□□□□ 0.27
AL391117.1-201ENST00000640003 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
AL391117.1-201ENST00000640003 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
AL391117.1-201ENST00000640003 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
AL391117.1-201ENST00000640003 OTUD5Q96G74 571 aa16.62■□□□□ 0.25
AL391117.1-201ENST00000640003 MS4A3Q96HJ5 214 aa16.61■□□□□ 0.25
AL391117.1-201ENST00000640003 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms