RNA–Protein interactions for RNA: ENST00000639607.1

SPIN3-226, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,942 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-226ENST00000639607 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
SPIN3-226ENST00000639607 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
SPIN3-226ENST00000639607 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
SPIN3-226ENST00000639607 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
SPIN3-226ENST00000639607 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
SPIN3-226ENST00000639607 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
SPIN3-226ENST00000639607 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
SPIN3-226ENST00000639607 ABCC9O60706 1549 aa22.45■■□□□ 1.18
SPIN3-226ENST00000639607 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
SPIN3-226ENST00000639607 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
SPIN3-226ENST00000639607 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
SPIN3-226ENST00000639607 NACADO15069 1562 aa21.85■■□□□ 1.09
SPIN3-226ENST00000639607 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
SPIN3-226ENST00000639607 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
SPIN3-226ENST00000639607 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
SPIN3-226ENST00000639607 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
SPIN3-226ENST00000639607 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
SPIN3-226ENST00000639607 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.04
SPIN3-226ENST00000639607 FAM9AQ8IZU1 332 aaPredicted RBP21.48■■□□□ 1.03
SPIN3-226ENST00000639607 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
SPIN3-226ENST00000639607 TRIM41Q8WV44 630 aa21.45■■□□□ 1.03
SPIN3-226ENST00000639607 WIZO95785 1651 aa21.43■■□□□ 1.02
SPIN3-226ENST00000639607 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
SPIN3-226ENST00000639607 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
SPIN3-226ENST00000639607 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
SPIN3-226ENST00000639607 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
SPIN3-226ENST00000639607 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.97
SPIN3-226ENST00000639607 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
SPIN3-226ENST00000639607 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
SPIN3-226ENST00000639607 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
SPIN3-226ENST00000639607 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
SPIN3-226ENST00000639607 PPARGC1BQ86YN6 1023 aaKnown RBP20.86■□□□□ 0.93
SPIN3-226ENST00000639607 HRCP23327 699 aa20.84■□□□□ 0.93
SPIN3-226ENST00000639607 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
SPIN3-226ENST00000639607 TRIM26Q12899 539 aaPredicted RBP20.74■□□□□ 0.91
SPIN3-226ENST00000639607 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
SPIN3-226ENST00000639607 SOGA1O94964 1423 aa20.69■□□□□ 0.9
SPIN3-226ENST00000639607 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
SPIN3-226ENST00000639607 TTBK1Q5TCY1 1321 aaPredicted RBP20.66■□□□□ 0.9
SPIN3-226ENST00000639607 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
SPIN3-226ENST00000639607 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.88
SPIN3-226ENST00000639607 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
SPIN3-226ENST00000639607 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
SPIN3-226ENST00000639607 CSRNP3Q8WYN3 585 aa20.51■□□□□ 0.87
SPIN3-226ENST00000639607 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
SPIN3-226ENST00000639607 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
SPIN3-226ENST00000639607 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
SPIN3-226ENST00000639607 NCAPD3P42695 1498 aa20.29■□□□□ 0.84
SPIN3-226ENST00000639607 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
SPIN3-226ENST00000639607 EEA1Q15075 1411 aa20.25■□□□□ 0.83
SPIN3-226ENST00000639607 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
SPIN3-226ENST00000639607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
SPIN3-226ENST00000639607 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
SPIN3-226ENST00000639607 RAPGEF2Q9Y4G8 1499 aa20.15■□□□□ 0.82
SPIN3-226ENST00000639607 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
SPIN3-226ENST00000639607 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
SPIN3-226ENST00000639607 CUX1P39880 1505 aa20.08■□□□□ 0.8
SPIN3-226ENST00000639607 CFTRP13569 1480 aa20.07■□□□□ 0.8
SPIN3-226ENST00000639607 CLIP1P30622 1438 aa20.06■□□□□ 0.8
SPIN3-226ENST00000639607 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
SPIN3-226ENST00000639607 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
SPIN3-226ENST00000639607 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
SPIN3-226ENST00000639607 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
SPIN3-226ENST00000639607 KIF21BO75037 1637 aa19.98■□□□□ 0.79
SPIN3-226ENST00000639607 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
SPIN3-226ENST00000639607 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
SPIN3-226ENST00000639607 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
SPIN3-226ENST00000639607 APLP2Q06481 763 aa19.94■□□□□ 0.78
SPIN3-226ENST00000639607 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
SPIN3-226ENST00000639607 NESP48681 1621 aa19.89■□□□□ 0.77
SPIN3-226ENST00000639607 CUX2O14529 1486 aa19.87■□□□□ 0.77
SPIN3-226ENST00000639607 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
SPIN3-226ENST00000639607 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
SPIN3-226ENST00000639607 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
SPIN3-226ENST00000639607 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
SPIN3-226ENST00000639607 KANK4Q5T7N3 995 aaPredicted RBP19.77■□□□□ 0.76
SPIN3-226ENST00000639607 IGF1RP08069 1367 aa19.77■□□□□ 0.76
SPIN3-226ENST00000639607 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
SPIN3-226ENST00000639607 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
SPIN3-226ENST00000639607 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
SPIN3-226ENST00000639607 ERICH3Q5RHP9 1530 aa19.72■□□□□ 0.75
SPIN3-226ENST00000639607 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
SPIN3-226ENST00000639607 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
SPIN3-226ENST00000639607 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
SPIN3-226ENST00000639607 ITGAEP38570 1179 aa19.64■□□□□ 0.73
SPIN3-226ENST00000639607 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
SPIN3-226ENST00000639607 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
SPIN3-226ENST00000639607 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
SPIN3-226ENST00000639607 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
SPIN3-226ENST00000639607 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
SPIN3-226ENST00000639607 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
SPIN3-226ENST00000639607 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
SPIN3-226ENST00000639607 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
SPIN3-226ENST00000639607 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
SPIN3-226ENST00000639607 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
SPIN3-226ENST00000639607 DIEXFQ68CQ4 756 aaKnown RBP19.41■□□□□ 0.7
SPIN3-226ENST00000639607 FAM50AQ14320 339 aaKnown RBP19.38■□□□□ 0.69
SPIN3-226ENST00000639607 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
SPIN3-226ENST00000639607 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
SPIN3-226ENST00000639607 GAPVD1Q14C86 1478 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms