RNA–Protein interactions for RNA: ENST00000639507.1

AP000550.4-201, humanhuman

TSL 3 BASIC

Gene AP000550.4, Length 358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.4-201ENST00000639507 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
AP000550.4-201ENST00000639507 CHIC1Q5VXU3 224 aa12.79□□□□□ -0.36
AP000550.4-201ENST00000639507 SENP3Q9H4L4 574 aaPredicted RBP11.52□□□□□ -0.57
AP000550.4-201ENST00000639507 PHF23Q9BUL5 403 aaPredicted RBP11.34□□□□□ -0.59
AP000550.4-201ENST00000639507 FOXD1Q16676 465 aa10.72□□□□□ -0.69
AP000550.4-201ENST00000639507 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
AP000550.4-201ENST00000639507 MSH5O43196 834 aa10.08□□□□□ -0.8
AP000550.4-201ENST00000639507 PPP6R1Q9UPN7 881 aa9.99□□□□□ -0.81
AP000550.4-201ENST00000639507 PIAS4Q8N2W9 510 aaPredicted RBP9.97□□□□□ -0.81
AP000550.4-201ENST00000639507 ADRA2BP18089 450 aa9.92□□□□□ -0.82
AP000550.4-201ENST00000639507 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
AP000550.4-201ENST00000639507 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
AP000550.4-201ENST00000639507 DMRT2Q9Y5R5 561 aa9.14□□□□□ -0.95
AP000550.4-201ENST00000639507 MAPK8IP2Q13387 824 aaPredicted RBP9.11□□□□□ -0.95
AP000550.4-201ENST00000639507 PPP4R3CPQ6ZMV5 832 aa8.91□□□□□ -0.98
AP000550.4-201ENST00000639507 HOXD11P31277 338 aaPredicted RBP8.83□□□□□ -1
AP000550.4-201ENST00000639507 CNKSR2Q8WXI2 1034 aa8.79□□□□□ -1
AP000550.4-201ENST00000639507 RNF216Q9NWF9 866 aaPredicted RBP8.73□□□□□ -1.01
AP000550.4-201ENST00000639507 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
AP000550.4-201ENST00000639507 DCAF8L1A6NGE4 600 aa8.61□□□□□ -1.03
AP000550.4-201ENST00000639507 RNF39Q9H2S5 420 aa8.6□□□□□ -1.03
AP000550.4-201ENST00000639507 CACNB1Q02641 598 aaPredicted RBP8.59□□□□□ -1.03
AP000550.4-201ENST00000639507 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
AP000550.4-201ENST00000639507 C1QBPQ07021 282 aaKnown RBP8.48□□□□□ -1.05
AP000550.4-201ENST00000639507 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
AP000550.4-201ENST00000639507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.3□□□□□ -1.08
AP000550.4-201ENST00000639507 KCNA4P22459 653 aa8.22□□□□□ -1.09
AP000550.4-201ENST00000639507 U3KPZ7 1027 aaPredicted RBP8.17□□□□□ -1.1
AP000550.4-201ENST00000639507 SLC4A2P04920 1241 aa8.08□□□□□ -1.12
AP000550.4-201ENST00000639507 DSG3P32926 999 aa8.02□□□□□ -1.13
AP000550.4-201ENST00000639507 SPINK5Q9NQ38 1064 aaPredicted RBP8.02□□□□□ -1.13
AP000550.4-201ENST00000639507 CAPN15O75808 1086 aa7.98□□□□□ -1.13
AP000550.4-201ENST00000639507 APLP2Q06481 763 aa7.97□□□□□ -1.13
AP000550.4-201ENST00000639507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.14
AP000550.4-201ENST00000639507 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.14
AP000550.4-201ENST00000639507 ZNF219Q9P2Y4 722 aaPredicted RBP7.91□□□□□ -1.14
AP000550.4-201ENST00000639507 SAMD1Q6SPF0 538 aaPredicted RBP7.9□□□□□ -1.14
AP000550.4-201ENST00000639507 TRHP20396 242 aaPredicted RBP7.83□□□□□ -1.16
AP000550.4-201ENST00000639507 MYCNP04198 464 aaPredicted RBP7.82□□□□□ -1.16
AP000550.4-201ENST00000639507 ABCB7O75027 752 aa7.76□□□□□ -1.17
AP000550.4-201ENST00000639507 SLC4A1APQ9BWU0 796 aaKnown RBP7.75□□□□□ -1.17
AP000550.4-201ENST00000639507 FOXD4L1Q9NU39 408 aa7.71□□□□□ -1.18
AP000550.4-201ENST00000639507 POTEHQ6S545 545 aa7.7□□□□□ -1.18
AP000550.4-201ENST00000639507 RBM42Q9BTD8 480 aaKnown RBP7.67□□□□□ -1.18
AP000550.4-201ENST00000639507 POLA2Q14181 598 aa7.66□□□□□ -1.18
AP000550.4-201ENST00000639507 ATF5Q9Y2D1 282 aaPredicted RBP7.6□□□□□ -1.19
AP000550.4-201ENST00000639507 ZBTB22O15209 634 aa7.57□□□□□ -1.2
AP000550.4-201ENST00000639507 ZBTB12Q9Y330 459 aaPredicted RBP7.56□□□□□ -1.2
AP000550.4-201ENST00000639507 ATXN8OSP0DMR3 200 aa7.55□□□□□ -1.2
AP000550.4-201ENST00000639507 AKT1S1Q96B36 256 aa7.49□□□□□ -1.21
AP000550.4-201ENST00000639507 CHRDL2Q6WN34 429 aa7.48□□□□□ -1.21
AP000550.4-201ENST00000639507 OSCARQ8IYS5 282 aa7.4□□□□□ -1.22
AP000550.4-201ENST00000639507 REM2Q8IYK8 340 aaPredicted RBP7.39□□□□□ -1.23
AP000550.4-201ENST00000639507 SPDYE2BA6NHP3 402 aa7.32□□□□□ -1.24
AP000550.4-201ENST00000639507 SPDYE6P0CI01 402 aa7.32□□□□□ -1.24
AP000550.4-201ENST00000639507 SPDYE2Q495Y8 402 aa7.32□□□□□ -1.24
AP000550.4-201ENST00000639507 FBLN2P98095 1184 aa7.31□□□□□ -1.24
AP000550.4-201ENST00000639507 PIP4P2Q8N4L2 257 aa7.3□□□□□ -1.24
AP000550.4-201ENST00000639507 PITPNM1O00562 1244 aa7.29□□□□□ -1.24
AP000550.4-201ENST00000639507 FXR2P51116 673 aaKnown RBP eCLIP7.29□□□□□ -1.24
AP000550.4-201ENST00000639507 MKRN4PQ13434 485 aaPredicted RBP7.28□□□□□ -1.24
AP000550.4-201ENST00000639507 SSUH2Q9Y2M2 353 aa7.24□□□□□ -1.25
AP000550.4-201ENST00000639507 SP7Q8TDD2 431 aaPredicted RBP7.22□□□□□ -1.25
AP000550.4-201ENST00000639507 CSRNP3Q8WYN3 585 aa7.2□□□□□ -1.26
AP000550.4-201ENST00000639507 SPDYE1Q8NFV5 336 aaPredicted RBP7.18□□□□□ -1.26
AP000550.4-201ENST00000639507 ZNF692Q9BU19 519 aaPredicted RBP7.17□□□□□ -1.26
AP000550.4-201ENST00000639507 HAX1O00165 279 aa7.12□□□□□ -1.27
AP000550.4-201ENST00000639507 PRKAR2AP13861 404 aaKnown RBP7.09□□□□□ -1.27
AP000550.4-201ENST00000639507 CLEC11AQ9Y240 323 aa7.08□□□□□ -1.28
AP000550.4-201ENST00000639507 EVX2Q03828 476 aa7.06□□□□□ -1.28
AP000550.4-201ENST00000639507 PABPN1Q86U42 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
AP000550.4-201ENST00000639507 C19orf67A6NJJ6 358 aa7.05□□□□□ -1.28
AP000550.4-201ENST00000639507 PRR29P0C7W0 189 aa7.01□□□□□ -1.29
AP000550.4-201ENST00000639507 EHMT2Q96KQ7 1210 aa6.97□□□□□ -1.29
AP000550.4-201ENST00000639507 CHADLQ6NUI6 762 aa6.96□□□□□ -1.3
AP000550.4-201ENST00000639507 GABBR2O75899 941 aa6.92□□□□□ -1.3
AP000550.4-201ENST00000639507 STAG3Q9UJ98 1225 aa6.92□□□□□ -1.3
AP000550.4-201ENST00000639507 FARP1Q9Y4F1 1045 aaPredicted RBP6.92□□□□□ -1.3
AP000550.4-201ENST00000639507 CLCN6P51797 869 aa6.91□□□□□ -1.3
AP000550.4-201ENST00000639507 SPDYE4A6NLX3 237 aa6.89□□□□□ -1.31
AP000550.4-201ENST00000639507 CREBZFQ9NS37 354 aa6.87□□□□□ -1.31
AP000550.4-201ENST00000639507 CD44P16070 742 aaKnown RBP6.86□□□□□ -1.31
AP000550.4-201ENST00000639507 PROM2Q8N271 834 aa6.83□□□□□ -1.32
AP000550.4-201ENST00000639507 ZNF579Q8NAF0 562 aaKnown RBP6.81□□□□□ -1.32
AP000550.4-201ENST00000639507 POTEIP0CG38 1075 aa6.78□□□□□ -1.32
AP000550.4-201ENST00000639507 MNX1P50219 401 aaPredicted RBP6.78□□□□□ -1.32
AP000550.4-201ENST00000639507 LHX8Q68G74 356 aa6.76□□□□□ -1.33
AP000550.4-201ENST00000639507 ZRANB1Q9UGI0 708 aa6.74□□□□□ -1.33
AP000550.4-201ENST00000639507 NPM1P06748 294 aaKnown RBP eCLIP6.73□□□□□ -1.33
AP000550.4-201ENST00000639507 PAK3O75914 559 aaPredicted RBP6.69□□□□□ -1.34
AP000550.4-201ENST00000639507 DCBLD2Q96PD2 775 aa6.69□□□□□ -1.34
AP000550.4-201ENST00000639507 GALR2O43603 387 aaPredicted RBP6.67□□□□□ -1.34
AP000550.4-201ENST00000639507 PHF12Q96QT6 1004 aa6.64□□□□□ -1.35
AP000550.4-201ENST00000639507 ASTLQ6HA08 431 aaPredicted RBP6.6□□□□□ -1.35
AP000550.4-201ENST00000639507 CCDC61Q9Y6R9 512 aa6.6□□□□□ -1.35
AP000550.4-201ENST00000639507 MS4A3Q96HJ5 214 aa6.57□□□□□ -1.36
AP000550.4-201ENST00000639507 PLEKHG5O94827 1062 aa6.56□□□□□ -1.36
AP000550.4-201ENST00000639507 PELP1Q8IZL8 1130 aaKnown RBP6.56□□□□□ -1.36
AP000550.4-201ENST00000639507 ATMINO43313 823 aaPredicted RBP6.55□□□□□ -1.36
AP000550.4-201ENST00000639507 MIER1Q8N108 512 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms