RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
PAX6-244ENST00000638913 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.51
PAX6-244ENST00000638913 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
PAX6-244ENST00000638913 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
PAX6-244ENST00000638913 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
PAX6-244ENST00000638913 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
PAX6-244ENST00000638913 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.37
PAX6-244ENST00000638913 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
PAX6-244ENST00000638913 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
PAX6-244ENST00000638913 ABCC9O60706 1549 aa17.08■□□□□ 0.32
PAX6-244ENST00000638913 PCGF6Q9BYE7 350 aa16.99■□□□□ 0.31
PAX6-244ENST00000638913 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
PAX6-244ENST00000638913 HRCP23327 699 aa16.89■□□□□ 0.3
PAX6-244ENST00000638913 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
PAX6-244ENST00000638913 NACADO15069 1562 aa16.77■□□□□ 0.28
PAX6-244ENST00000638913 PPARGC1BQ86YN6 1023 aaKnown RBP16.74■□□□□ 0.27
PAX6-244ENST00000638913 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
PAX6-244ENST00000638913 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
PAX6-244ENST00000638913 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
PAX6-244ENST00000638913 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
PAX6-244ENST00000638913 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.25
PAX6-244ENST00000638913 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
PAX6-244ENST00000638913 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
PAX6-244ENST00000638913 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
PAX6-244ENST00000638913 MROH2BQ7Z745 1585 aa16.37■□□□□ 0.21
PAX6-244ENST00000638913 WIZO95785 1651 aa16.28■□□□□ 0.2
PAX6-244ENST00000638913 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
PAX6-244ENST00000638913 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
PAX6-244ENST00000638913 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
PAX6-244ENST00000638913 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
PAX6-244ENST00000638913 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
PAX6-244ENST00000638913 TTBK1Q5TCY1 1321 aaPredicted RBP16.08■□□□□ 0.16
PAX6-244ENST00000638913 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
PAX6-244ENST00000638913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
PAX6-244ENST00000638913 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
PAX6-244ENST00000638913 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
PAX6-244ENST00000638913 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
PAX6-244ENST00000638913 SOGA1O94964 1423 aa15.9■□□□□ 0.14
PAX6-244ENST00000638913 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
PAX6-244ENST00000638913 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
PAX6-244ENST00000638913 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
PAX6-244ENST00000638913 RUSC2Q8N2Y8 1516 aa15.83■□□□□ 0.13
PAX6-244ENST00000638913 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
PAX6-244ENST00000638913 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
PAX6-244ENST00000638913 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
PAX6-244ENST00000638913 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.12
PAX6-244ENST00000638913 TNIKQ9UKE5 1360 aa15.71■□□□□ 0.11
PAX6-244ENST00000638913 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
PAX6-244ENST00000638913 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
PAX6-244ENST00000638913 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
PAX6-244ENST00000638913 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
PAX6-244ENST00000638913 EEA1Q15075 1411 aa15.61■□□□□ 0.09
PAX6-244ENST00000638913 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
PAX6-244ENST00000638913 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
PAX6-244ENST00000638913 DIEXFQ68CQ4 756 aaKnown RBP15.58■□□□□ 0.09
PAX6-244ENST00000638913 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
PAX6-244ENST00000638913 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
PAX6-244ENST00000638913 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
PAX6-244ENST00000638913 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
PAX6-244ENST00000638913 CLIP1P30622 1438 aa15.5■□□□□ 0.07
PAX6-244ENST00000638913 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
PAX6-244ENST00000638913 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
PAX6-244ENST00000638913 ACIN1Q9UKV3 1341 aaKnown RBP15.46■□□□□ 0.07
PAX6-244ENST00000638913 APLP2Q06481 763 aa15.46■□□□□ 0.07
PAX6-244ENST00000638913 ZNF316A6NFI3 1004 aaPredicted RBP15.41■□□□□ 0.06
PAX6-244ENST00000638913 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
PAX6-244ENST00000638913 KIF21BO75037 1637 aa15.39■□□□□ 0.05
PAX6-244ENST00000638913 VPS8Q8N3P4 1428 aa15.38■□□□□ 0.05
PAX6-244ENST00000638913 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
PAX6-244ENST00000638913 GTF3C3Q9Y5Q9 886 aa15.36■□□□□ 0.05
PAX6-244ENST00000638913 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
PAX6-244ENST00000638913 CFTRP13569 1480 aa15.29■□□□□ 0.04
PAX6-244ENST00000638913 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
PAX6-244ENST00000638913 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
PAX6-244ENST00000638913 MIER1Q8N108 512 aa15.28■□□□□ 0.04
PAX6-244ENST00000638913 CUX1P39880 1505 aa15.22■□□□□ 0.03
PAX6-244ENST00000638913 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
PAX6-244ENST00000638913 ITGAEP38570 1179 aa15.21■□□□□ 0.03
PAX6-244ENST00000638913 PRXQ9BXM0 1461 aa15.21■□□□□ 0.02
PAX6-244ENST00000638913 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
PAX6-244ENST00000638913 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
PAX6-244ENST00000638913 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
PAX6-244ENST00000638913 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
PAX6-244ENST00000638913 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
PAX6-244ENST00000638913 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
PAX6-244ENST00000638913 ERICH3Q5RHP9 1530 aa15.13■□□□□ 0.01
PAX6-244ENST00000638913 NESP48681 1621 aa15.12■□□□□ 0.01
PAX6-244ENST00000638913 DHX57Q6P158 1386 aaKnown RBP15.12■□□□□ 0.01
PAX6-244ENST00000638913 P3H3Q8IVL6 736 aa15.07■□□□□ 0
PAX6-244ENST00000638913 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
PAX6-244ENST00000638913 CUX2O14529 1486 aa15.06■□□□□ 0
PAX6-244ENST00000638913 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
PAX6-244ENST00000638913 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
PAX6-244ENST00000638913 IGF1RP08069 1367 aa15.04■□□□□ -0
PAX6-244ENST00000638913 CCNB3Q8WWL7 1395 aa15.02□□□□□ -0.01
PAX6-244ENST00000638913 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
PAX6-244ENST00000638913 FGD5Q6ZNL6 1462 aa14.99□□□□□ -0.01
PAX6-244ENST00000638913 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
PAX6-244ENST00000638913 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
PAX6-244ENST00000638913 FAM50AQ14320 339 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms