RNA–Protein interactions for RNA: ENST00000638173.1

AC006460.2-201, humanhuman

TSL 5 BASIC

Gene AC006460.2, Length 4,744 nt, Biotype bidirectional promoter lncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006460.2-201ENST00000638173 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
AC006460.2-201ENST00000638173 DCAF8L2P0C7V8 631 aa28.6■■■□□ 2.17
AC006460.2-201ENST00000638173 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
AC006460.2-201ENST00000638173 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
AC006460.2-201ENST00000638173 EHMT2Q96KQ7 1210 aa26.5■■□□□ 1.83
AC006460.2-201ENST00000638173 PCGF6Q9BYE7 350 aa26.2■■□□□ 1.79
AC006460.2-201ENST00000638173 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
AC006460.2-201ENST00000638173 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
AC006460.2-201ENST00000638173 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
AC006460.2-201ENST00000638173 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
AC006460.2-201ENST00000638173 LOC105371045A0A1W2PR82 267 aa25.57■■□□□ 1.68
AC006460.2-201ENST00000638173 HRCP23327 699 aa25.34■■□□□ 1.65
AC006460.2-201ENST00000638173 PPARGC1BQ86YN6 1023 aaKnown RBP25.28■■□□□ 1.64
AC006460.2-201ENST00000638173 APLP2Q06481 763 aa25.26■■□□□ 1.63
AC006460.2-201ENST00000638173 TRIM26Q12899 539 aaPredicted RBP25.22■■□□□ 1.63
AC006460.2-201ENST00000638173 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
AC006460.2-201ENST00000638173 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
AC006460.2-201ENST00000638173 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
AC006460.2-201ENST00000638173 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
AC006460.2-201ENST00000638173 UBTFP17480 764 aaKnown RBP25.11■■□□□ 1.61
AC006460.2-201ENST00000638173 ABCC9O60706 1549 aa24.98■■□□□ 1.59
AC006460.2-201ENST00000638173 CCDC180Q9P1Z9 1646 aa24.79■■□□□ 1.56
AC006460.2-201ENST00000638173 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
AC006460.2-201ENST00000638173 CENPBP07199 599 aaPredicted RBP24.57■■□□□ 1.52
AC006460.2-201ENST00000638173 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
AC006460.2-201ENST00000638173 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
AC006460.2-201ENST00000638173 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
AC006460.2-201ENST00000638173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
AC006460.2-201ENST00000638173 YTHDC1Q96MU7 727 aaKnown RBP24.43■■□□□ 1.5
AC006460.2-201ENST00000638173 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
AC006460.2-201ENST00000638173 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
AC006460.2-201ENST00000638173 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
AC006460.2-201ENST00000638173 ITGAEP38570 1179 aa24.24■■□□□ 1.47
AC006460.2-201ENST00000638173 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
AC006460.2-201ENST00000638173 DIEXFQ68CQ4 756 aaKnown RBP24.08■■□□□ 1.45
AC006460.2-201ENST00000638173 CSRNP3Q8WYN3 585 aa24.06■■□□□ 1.44
AC006460.2-201ENST00000638173 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
AC006460.2-201ENST00000638173 NACADO15069 1562 aa23.69■■□□□ 1.38
AC006460.2-201ENST00000638173 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
AC006460.2-201ENST00000638173 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
AC006460.2-201ENST00000638173 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
AC006460.2-201ENST00000638173 NEFLP07196 543 aa23.62■■□□□ 1.37
AC006460.2-201ENST00000638173 GTF3C3Q9Y5Q9 886 aa23.62■■□□□ 1.37
AC006460.2-201ENST00000638173 NEUROD1Q13562 356 aa23.54■■□□□ 1.36
AC006460.2-201ENST00000638173 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
AC006460.2-201ENST00000638173 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
AC006460.2-201ENST00000638173 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
AC006460.2-201ENST00000638173 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
AC006460.2-201ENST00000638173 BAZ1AQ9NRL2 1556 aaPredicted RBP23.39■■□□□ 1.34
AC006460.2-201ENST00000638173 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
AC006460.2-201ENST00000638173 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
AC006460.2-201ENST00000638173 CLIP1P30622 1438 aa23.35■■□□□ 1.33
AC006460.2-201ENST00000638173 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
AC006460.2-201ENST00000638173 ERICH6Q7L0X2 663 aa23.32■■□□□ 1.32
AC006460.2-201ENST00000638173 TRIM52Q96A61 297 aa23.29■■□□□ 1.32
AC006460.2-201ENST00000638173 EEA1Q15075 1411 aa23.28■■□□□ 1.32
AC006460.2-201ENST00000638173 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
AC006460.2-201ENST00000638173 SOGA1O94964 1423 aa23.28■■□□□ 1.32
AC006460.2-201ENST00000638173 GOLGA3Q08378 1498 aa23.28■■□□□ 1.32
AC006460.2-201ENST00000638173 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
AC006460.2-201ENST00000638173 ARID3CA6NKF2 412 aa23.2■■□□□ 1.3
AC006460.2-201ENST00000638173 WIZO95785 1651 aa23.2■■□□□ 1.3
AC006460.2-201ENST00000638173 ABCC8Q09428 1581 aa23.19■■□□□ 1.3
AC006460.2-201ENST00000638173 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
AC006460.2-201ENST00000638173 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
AC006460.2-201ENST00000638173 BCANQ96GW7 911 aa23.14■■□□□ 1.29
AC006460.2-201ENST00000638173 MIER1Q8N108 512 aa23.11■■□□□ 1.29
AC006460.2-201ENST00000638173 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.28
AC006460.2-201ENST00000638173 ANP32CO43423 234 aa23.07■■□□□ 1.28
AC006460.2-201ENST00000638173 MYT1Q01538 1121 aa23.06■■□□□ 1.28
AC006460.2-201ENST00000638173 FBLN2P98095 1184 aa23.02■■□□□ 1.28
AC006460.2-201ENST00000638173 MYT1LQ9UL68 1186 aa22.97■■□□□ 1.27
AC006460.2-201ENST00000638173 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
AC006460.2-201ENST00000638173 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
AC006460.2-201ENST00000638173 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
AC006460.2-201ENST00000638173 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
AC006460.2-201ENST00000638173 HIRIP3Q9BW71 556 aaPredicted RBP22.85■■□□□ 1.25
AC006460.2-201ENST00000638173 CHIC2Q9UKJ5 165 aa22.85■■□□□ 1.25
AC006460.2-201ENST00000638173 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
AC006460.2-201ENST00000638173 ZNF777Q9ULD5 760 aaPredicted RBP22.82■■□□□ 1.24
AC006460.2-201ENST00000638173 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
AC006460.2-201ENST00000638173 MTUS2Q5JR59 1369 aa22.76■■□□□ 1.23
AC006460.2-201ENST00000638173 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
AC006460.2-201ENST00000638173 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
AC006460.2-201ENST00000638173 KANK4Q5T7N3 995 aaPredicted RBP22.74■■□□□ 1.23
AC006460.2-201ENST00000638173 FKBP8Q14318 412 aa22.7■■□□□ 1.23
AC006460.2-201ENST00000638173 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
AC006460.2-201ENST00000638173 SIN3AQ96ST3 1273 aa22.65■■□□□ 1.22
AC006460.2-201ENST00000638173 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.21
AC006460.2-201ENST00000638173 SMARCA2P51531 1590 aa22.64■■□□□ 1.21
AC006460.2-201ENST00000638173 CUX2O14529 1486 aa22.63■■□□□ 1.21
AC006460.2-201ENST00000638173 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
AC006460.2-201ENST00000638173 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
AC006460.2-201ENST00000638173 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
AC006460.2-201ENST00000638173 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
AC006460.2-201ENST00000638173 HNRNPUQ00839 825 aaKnown RBP eCLIP22.6■■□□□ 1.21
AC006460.2-201ENST00000638173 CLSPNQ9HAW4 1339 aa22.56■■□□□ 1.2
AC006460.2-201ENST00000638173 SLC4A1APQ9BWU0 796 aaKnown RBP22.53■■□□□ 1.2
AC006460.2-201ENST00000638173 FAM9BQ8IZU0 186 aa22.52■■□□□ 1.2
AC006460.2-201ENST00000638173 DAXXQ9UER7 740 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms