RNA–Protein interactions for RNA: ENST00000637982.1

AMT-254, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,330 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-254ENST00000637982 NISCHQ9Y2I1 1504 aa36.23■■■■□ 3.39
AMT-254ENST00000637982 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
AMT-254ENST00000637982 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
AMT-254ENST00000637982 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.43
AMT-254ENST00000637982 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
AMT-254ENST00000637982 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
AMT-254ENST00000637982 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
AMT-254ENST00000637982 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
AMT-254ENST00000637982 CHIC1Q5VXU3 224 aa28.87■■■□□ 2.21
AMT-254ENST00000637982 ABCC9O60706 1549 aa28.86■■■□□ 2.21
AMT-254ENST00000637982 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
AMT-254ENST00000637982 NACADO15069 1562 aa28.75■■■□□ 2.19
AMT-254ENST00000637982 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
AMT-254ENST00000637982 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
AMT-254ENST00000637982 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
AMT-254ENST00000637982 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
AMT-254ENST00000637982 WIZO95785 1651 aa27.89■■■□□ 2.06
AMT-254ENST00000637982 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
AMT-254ENST00000637982 LOC105371045A0A1W2PR82 267 aa27.82■■■□□ 2.04
AMT-254ENST00000637982 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
AMT-254ENST00000637982 TRIM41Q8WV44 630 aa27.74■■■□□ 2.03
AMT-254ENST00000637982 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
AMT-254ENST00000637982 TOP2AP11388 1531 aaKnown RBP27.58■■■□□ 2.01
AMT-254ENST00000637982 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
AMT-254ENST00000637982 HRCP23327 699 aa27.57■■■□□ 2
AMT-254ENST00000637982 PCGF6Q9BYE7 350 aa27.54■■■□□ 2
AMT-254ENST00000637982 BICRAQ9NZM4 1560 aa27.48■■□□□ 1.99
AMT-254ENST00000637982 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
AMT-254ENST00000637982 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
AMT-254ENST00000637982 TRIM26Q12899 539 aaPredicted RBP27.29■■□□□ 1.96
AMT-254ENST00000637982 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
AMT-254ENST00000637982 PEG3Q9GZU2 1588 aa27.27■■□□□ 1.96
AMT-254ENST00000637982 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.943e-6■■■■□ 23.3
AMT-254ENST00000637982 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
AMT-254ENST00000637982 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
AMT-254ENST00000637982 EEA1Q15075 1411 aa26.89■■□□□ 1.9
AMT-254ENST00000637982 EHMT2Q96KQ7 1210 aa26.85■■□□□ 1.89
AMT-254ENST00000637982 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
AMT-254ENST00000637982 SOGA1O94964 1423 aa26.79■■□□□ 1.88
AMT-254ENST00000637982 PPARGC1BQ86YN6 1023 aaKnown RBP26.78■■□□□ 1.88
AMT-254ENST00000637982 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
AMT-254ENST00000637982 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.87
AMT-254ENST00000637982 ZEB1P37275 1124 aaPredicted RBP26.7■■□□□ 1.86
AMT-254ENST00000637982 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
AMT-254ENST00000637982 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
AMT-254ENST00000637982 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
AMT-254ENST00000637982 CEP162Q5TB80 1403 aa26.62■■□□□ 1.85
AMT-254ENST00000637982 HMGXB3Q12766 1538 aa26.58■■□□□ 1.85
AMT-254ENST00000637982 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
AMT-254ENST00000637982 NCAPD3P42695 1498 aa26.56■■□□□ 1.84
AMT-254ENST00000637982 KIF21BO75037 1637 aa26.51■■□□□ 1.83
AMT-254ENST00000637982 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
AMT-254ENST00000637982 TOP2BQ02880 1626 aa26.45■■□□□ 1.83
AMT-254ENST00000637982 BIVM-ERCC5R4GMW8 1640 aa26.41■■□□□ 1.82
AMT-254ENST00000637982 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
AMT-254ENST00000637982 CFTRP13569 1480 aa26.24■■□□□ 1.79
AMT-254ENST00000637982 RAPGEF2Q9Y4G8 1499 aa26.19■■□□□ 1.78
AMT-254ENST00000637982 CLIP1P30622 1438 aa26.19■■□□□ 1.78
AMT-254ENST00000637982 CUX1P39880 1505 aa26.17■■□□□ 1.78
AMT-254ENST00000637982 PRDM2Q13029 1718 aa26.16■■□□□ 1.78
AMT-254ENST00000637982 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
AMT-254ENST00000637982 VPS8Q8N3P4 1428 aa26.1■■□□□ 1.77
AMT-254ENST00000637982 PRXQ9BXM0 1461 aa26.1■■□□□ 1.77
AMT-254ENST00000637982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
AMT-254ENST00000637982 CCER1Q8TC90 406 aaPredicted RBP26.03■■□□□ 1.76
AMT-254ENST00000637982 KIF27Q86VH2 1401 aa26■■□□□ 1.75
AMT-254ENST00000637982 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
AMT-254ENST00000637982 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
AMT-254ENST00000637982 CC2D2AQ9P2K1 1620 aa25.9■■□□□ 1.74
AMT-254ENST00000637982 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
AMT-254ENST00000637982 APLP2Q06481 763 aa25.82■■□□□ 1.72
AMT-254ENST00000637982 CUX2O14529 1486 aa25.73■■□□□ 1.71
AMT-254ENST00000637982 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
AMT-254ENST00000637982 IGF1RP08069 1367 aa25.71■■□□□ 1.71
AMT-254ENST00000637982 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
AMT-254ENST00000637982 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
AMT-254ENST00000637982 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
AMT-254ENST00000637982 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
AMT-254ENST00000637982 HNRNPUL2Q1KMD3 747 aaKnown RBP25.6■■□□□ 1.69
AMT-254ENST00000637982 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
AMT-254ENST00000637982 ABCA10Q8WWZ4 1543 aa25.51■■□□□ 1.67
AMT-254ENST00000637982 TOPBP1Q92547 1522 aa25.5■■□□□ 1.67
AMT-254ENST00000637982 KANK4Q5T7N3 995 aaPredicted RBP25.5■■□□□ 1.67
AMT-254ENST00000637982 RRBP1Q9P2E9 1410 aaKnown RBP25.5■■□□□ 1.67
AMT-254ENST00000637982 MAP3K1Q13233 1512 aa25.49■■□□□ 1.67
AMT-254ENST00000637982 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
AMT-254ENST00000637982 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.66
AMT-254ENST00000637982 NESP48681 1621 aa25.43■■□□□ 1.66
AMT-254ENST00000637982 DIEXFQ68CQ4 756 aaKnown RBP25.42■■□□□ 1.66
AMT-254ENST00000637982 RAD54L2Q9Y4B4 1467 aa25.39■■□□□ 1.66
AMT-254ENST00000637982 CUL7Q14999 1698 aa25.39■■□□□ 1.65
AMT-254ENST00000637982 CLSPNQ9HAW4 1339 aa25.39■■□□□ 1.65
AMT-254ENST00000637982 ZNF316A6NFI3 1004 aaPredicted RBP25.38■■□□□ 1.65
AMT-254ENST00000637982 TIAM1Q13009 1591 aa25.38■■□□□ 1.65
AMT-254ENST00000637982 WDR97A6NE52 1622 aa25.35■■□□□ 1.65
AMT-254ENST00000637982 CCNB3Q8WWL7 1395 aa25.32■■□□□ 1.64
AMT-254ENST00000637982 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
AMT-254ENST00000637982 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
AMT-254ENST00000637982 EFCAB5A4FU69 1503 aa25.29■■□□□ 1.64
AMT-254ENST00000637982 DHX57Q6P158 1386 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms