RNA–Protein interactions for RNA: ENST00000637193.1

KCNQ2-236, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5 BASIC

Gene KCNQ2, Length 2,983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-236ENST00000637193 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
KCNQ2-236ENST00000637193 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
KCNQ2-236ENST00000637193 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
KCNQ2-236ENST00000637193 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
KCNQ2-236ENST00000637193 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
KCNQ2-236ENST00000637193 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
KCNQ2-236ENST00000637193 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
KCNQ2-236ENST00000637193 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
KCNQ2-236ENST00000637193 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
KCNQ2-236ENST00000637193 ABCC9O60706 1549 aa27.78■■■□□ 2.04
KCNQ2-236ENST00000637193 HRCP23327 699 aa27.73■■■□□ 2.03
KCNQ2-236ENST00000637193 PCGF6Q9BYE7 350 aa27.72■■■□□ 2.03
KCNQ2-236ENST00000637193 LOC105371045A0A1W2PR82 267 aa27.61■■■□□ 2.01
KCNQ2-236ENST00000637193 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
KCNQ2-236ENST00000637193 RSF1Q96T23 1441 aaPredicted RBP27.36■■□□□ 1.97
KCNQ2-236ENST00000637193 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
KCNQ2-236ENST00000637193 TRIM41Q8WV44 630 aa27.14■■□□□ 1.93
KCNQ2-236ENST00000637193 TRIM26Q12899 539 aaPredicted RBP27.08■■□□□ 1.93
KCNQ2-236ENST00000637193 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
KCNQ2-236ENST00000637193 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
KCNQ2-236ENST00000637193 NACADO15069 1562 aa26.92■■□□□ 1.9
KCNQ2-236ENST00000637193 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
KCNQ2-236ENST00000637193 EHMT2Q96KQ7 1210 aa26.82■■□□□ 1.88
KCNQ2-236ENST00000637193 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
KCNQ2-236ENST00000637193 WIZO95785 1651 aa26.62■■□□□ 1.85
KCNQ2-236ENST00000637193 ZEB1P37275 1124 aaPredicted RBP26.51■■□□□ 1.83
KCNQ2-236ENST00000637193 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
KCNQ2-236ENST00000637193 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
KCNQ2-236ENST00000637193 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
KCNQ2-236ENST00000637193 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
KCNQ2-236ENST00000637193 TOP2AP11388 1531 aaKnown RBP26.17■■□□□ 1.78
KCNQ2-236ENST00000637193 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
KCNQ2-236ENST00000637193 ABCC8Q09428 1581 aa26.15■■□□□ 1.78
KCNQ2-236ENST00000637193 SMARCA4P51532 1647 aa26.14■■□□□ 1.77
KCNQ2-236ENST00000637193 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
KCNQ2-236ENST00000637193 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
KCNQ2-236ENST00000637193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.04■■□□□ 1.76
KCNQ2-236ENST00000637193 SOGA1O94964 1423 aa25.98■■□□□ 1.75
KCNQ2-236ENST00000637193 TTBK1Q5TCY1 1321 aaPredicted RBP25.98■■□□□ 1.75
KCNQ2-236ENST00000637193 CCER1Q8TC90 406 aaPredicted RBP25.97■■□□□ 1.75
KCNQ2-236ENST00000637193 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
KCNQ2-236ENST00000637193 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
KCNQ2-236ENST00000637193 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
KCNQ2-236ENST00000637193 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
KCNQ2-236ENST00000637193 TNIKQ9UKE5 1360 aa25.84■■□□□ 1.73
KCNQ2-236ENST00000637193 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.73
KCNQ2-236ENST00000637193 EEA1Q15075 1411 aa25.77■■□□□ 1.72
KCNQ2-236ENST00000637193 SCAF1Q9H7N4 1312 aaKnown RBP25.66■■□□□ 1.7
KCNQ2-236ENST00000637193 GOLGA3Q08378 1498 aa25.64■■□□□ 1.7
KCNQ2-236ENST00000637193 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
KCNQ2-236ENST00000637193 DIEXFQ68CQ4 756 aaKnown RBP25.52■■□□□ 1.68
KCNQ2-236ENST00000637193 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.67
KCNQ2-236ENST00000637193 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
KCNQ2-236ENST00000637193 CEP164Q9UPV0 1460 aa25.48■■□□□ 1.67
KCNQ2-236ENST00000637193 BAZ1BQ9UIG0 1483 aaKnown RBP25.45■■□□□ 1.67
KCNQ2-236ENST00000637193 CLIP1P30622 1438 aa25.41■■□□□ 1.66
KCNQ2-236ENST00000637193 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
KCNQ2-236ENST00000637193 HNRNPUL2Q1KMD3 747 aaKnown RBP25.38■■□□□ 1.65
KCNQ2-236ENST00000637193 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
KCNQ2-236ENST00000637193 ACIN1Q9UKV3 1341 aaKnown RBP25.37■■□□□ 1.65
KCNQ2-236ENST00000637193 KIF21BO75037 1637 aa25.35■■□□□ 1.65
KCNQ2-236ENST00000637193 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
KCNQ2-236ENST00000637193 RAPGEF2Q9Y4G8 1499 aa25.32■■□□□ 1.64
KCNQ2-236ENST00000637193 APLP2Q06481 763 aa25.3■■□□□ 1.64
KCNQ2-236ENST00000637193 VPS8Q8N3P4 1428 aa25.28■■□□□ 1.64
KCNQ2-236ENST00000637193 ZNF316A6NFI3 1004 aaPredicted RBP25.26■■□□□ 1.63
KCNQ2-236ENST00000637193 CENPBP07199 599 aaPredicted RBP25.21■■□□□ 1.63
KCNQ2-236ENST00000637193 TOP2BQ02880 1626 aa25.14■■□□□ 1.62
KCNQ2-236ENST00000637193 GTF3C3Q9Y5Q9 886 aa25.12■■□□□ 1.61
KCNQ2-236ENST00000637193 PRXQ9BXM0 1461 aa25.01■■□□□ 1.59
KCNQ2-236ENST00000637193 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
KCNQ2-236ENST00000637193 YTHDC1Q96MU7 727 aaKnown RBP24.99■■□□□ 1.59
KCNQ2-236ENST00000637193 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
KCNQ2-236ENST00000637193 MIER1Q8N108 512 aa24.96■■□□□ 1.59
KCNQ2-236ENST00000637193 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
KCNQ2-236ENST00000637193 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
KCNQ2-236ENST00000637193 KANK4Q5T7N3 995 aaPredicted RBP24.94■■□□□ 1.58
KCNQ2-236ENST00000637193 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
KCNQ2-236ENST00000637193 CUX1P39880 1505 aa24.92■■□□□ 1.58
KCNQ2-236ENST00000637193 HMGXB3Q12766 1538 aa24.9■■□□□ 1.58
KCNQ2-236ENST00000637193 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
KCNQ2-236ENST00000637193 CFTRP13569 1480 aa24.82■■□□□ 1.56
KCNQ2-236ENST00000637193 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
KCNQ2-236ENST00000637193 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
KCNQ2-236ENST00000637193 CLSPNQ9HAW4 1339 aa24.76■■□□□ 1.55
KCNQ2-236ENST00000637193 ARHGAP35Q9NRY4 1499 aa24.71■■□□□ 1.55
KCNQ2-236ENST00000637193 RRBP1Q9P2E9 1410 aaKnown RBP24.69■■□□□ 1.54
KCNQ2-236ENST00000637193 ITGAEP38570 1179 aa24.69■■□□□ 1.54
KCNQ2-236ENST00000637193 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
KCNQ2-236ENST00000637193 IGF1RP08069 1367 aa24.64■■□□□ 1.54
KCNQ2-236ENST00000637193 CUX2O14529 1486 aa24.64■■□□□ 1.53
KCNQ2-236ENST00000637193 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
KCNQ2-236ENST00000637193 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
KCNQ2-236ENST00000637193 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
KCNQ2-236ENST00000637193 RAB3GAP2Q9H2M9 1393 aa24.46■■□□□ 1.51
KCNQ2-236ENST00000637193 P3H3Q8IVL6 736 aa24.45■■□□□ 1.5
KCNQ2-236ENST00000637193 NESP48681 1621 aa24.44■■□□□ 1.5
KCNQ2-236ENST00000637193 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
KCNQ2-236ENST00000637193 TIAM1Q13009 1591 aa24.4■■□□□ 1.5
KCNQ2-236ENST00000637193 PRDM2Q13029 1718 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms