RNA–Protein interactions for RNA: ENST00000636667.1

UBE3A-225, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 5,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-225ENST00000636667 AEBP2Q6ZN18 517 aaPredicted RBP6.33□□□□□ -1.4
UBE3A-225ENST00000636667 CHIC1Q5VXU3 224 aa6.01□□□□□ -1.45
UBE3A-225ENST00000636667 POTEDQ86YR6 584 aa5.75□□□□□ -1.49
UBE3A-225ENST00000636667 SENP3Q9H4L4 574 aaPredicted RBP5.32□□□□□ -1.56
UBE3A-225ENST00000636667 PHF23Q9BUL5 403 aaPredicted RBP5.3□□□□□ -1.56
UBE3A-225ENST00000636667 FOXD1Q16676 465 aa4.98□□□□□ -1.61
UBE3A-225ENST00000636667 PLPPR3Q6T4P5 718 aa4.74□□□□□ -1.65
UBE3A-225ENST00000636667 PPP6R1Q9UPN7 881 aa4.66□□□□□ -1.66
UBE3A-225ENST00000636667 MSH5O43196 834 aa4.65□□□□□ -1.67
UBE3A-225ENST00000636667 ADRA2BP18089 450 aa4.6□□□□□ -1.67
UBE3A-225ENST00000636667 PIAS4Q8N2W9 510 aaPredicted RBP4.57□□□□□ -1.68
UBE3A-225ENST00000636667 DMRT2Q9Y5R5 561 aa4.29□□□□□ -1.72
UBE3A-225ENST00000636667 MAPK8IP2Q13387 824 aaPredicted RBP4.23□□□□□ -1.73
UBE3A-225ENST00000636667 KCNA4P22459 653 aa4.22□□□□□ -1.73
UBE3A-225ENST00000636667 HOXD11P31277 338 aaPredicted RBP4.16□□□□□ -1.74
UBE3A-225ENST00000636667 SCAF1Q9H7N4 1312 aaKnown RBP4.16□□□□□ -1.74
UBE3A-225ENST00000636667 PPP4R3CPQ6ZMV5 832 aa4.16□□□□□ -1.74
UBE3A-225ENST00000636667 DNAJC5BQ9UF47 199 aa4.13□□□□□ -1.75
UBE3A-225ENST00000636667 RNF216Q9NWF9 866 aaPredicted RBP4.11□□□□□ -1.75
UBE3A-225ENST00000636667 CNKSR2Q8WXI2 1034 aa4.11□□□□□ -1.75
UBE3A-225ENST00000636667 POTEHQ6S545 545 aa4.09□□□□□ -1.76
UBE3A-225ENST00000636667 EHMT2Q96KQ7 1210 aa4.04□□□□□ -1.76
UBE3A-225ENST00000636667 ZBTB22O15209 634 aa4.04□□□□□ -1.76
UBE3A-225ENST00000636667 CSRNP3Q8WYN3 585 aa4.04□□□□□ -1.76
UBE3A-225ENST00000636667 RNF39Q9H2S5 420 aa4.02□□□□□ -1.77
UBE3A-225ENST00000636667 NPM3O75607 178 aaKnown RBP3.97□□□□□ -1.77
UBE3A-225ENST00000636667 NCBP3Q53F19 620 aaKnown RBP3.96□□□□□ -1.78
UBE3A-225ENST00000636667 C1QBPQ07021 282 aaKnown RBP3.9□□□□□ -1.79
UBE3A-225ENST00000636667 SLC4A1APQ9BWU0 796 aaKnown RBP3.87□□□□□ -1.79
UBE3A-225ENST00000636667 CACNB1Q02641 598 aaPredicted RBP3.84□□□□□ -1.79
UBE3A-225ENST00000636667 SLC4A2P04920 1241 aa3.83□□□□□ -1.8
UBE3A-225ENST00000636667 U3KPZ7 1027 aaPredicted RBP3.83□□□□□ -1.8
UBE3A-225ENST00000636667 DCAF8L1A6NGE4 600 aa3.82□□□□□ -1.8
UBE3A-225ENST00000636667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.76□□□□□ -1.81
UBE3A-225ENST00000636667 DSG3P32926 999 aa3.74□□□□□ -1.81
UBE3A-225ENST00000636667 SPINK5Q9NQ38 1064 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-225ENST00000636667 ATF5Q9Y2D1 282 aaPredicted RBP3.69□□□□□ -1.82
UBE3A-225ENST00000636667 FOXD4L1Q9NU39 408 aa3.67□□□□□ -1.82
UBE3A-225ENST00000636667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.65□□□□□ -1.82
UBE3A-225ENST00000636667 HNRNPUL2Q1KMD3 747 aaKnown RBP3.65□□□□□ -1.82
UBE3A-225ENST00000636667 MYCNP04198 464 aaPredicted RBP3.65□□□□□ -1.83
UBE3A-225ENST00000636667 APLP2Q06481 763 aa3.64□□□□□ -1.83
UBE3A-225ENST00000636667 SAMD1Q6SPF0 538 aaPredicted RBP3.64□□□□□ -1.83
UBE3A-225ENST00000636667 ZNF219Q9P2Y4 722 aaPredicted RBP3.63□□□□□ -1.83
UBE3A-225ENST00000636667 RTN4Q9NQC3 1192 aaKnown RBP3.63□□□□□ -1.83
UBE3A-225ENST00000636667 CAPN15O75808 1086 aa3.6□□□□□ -1.83
UBE3A-225ENST00000636667 ATXN8OSP0DMR3 200 aa3.59□□□□□ -1.83
UBE3A-225ENST00000636667 ABCB7O75027 752 aa3.53□□□□□ -1.84
UBE3A-225ENST00000636667 TRHP20396 242 aaPredicted RBP3.52□□□□□ -1.85
UBE3A-225ENST00000636667 POLA2Q14181 598 aa3.51□□□□□ -1.85
UBE3A-225ENST00000636667 MKRN4PQ13434 485 aaPredicted RBP3.49□□□□□ -1.85
UBE3A-225ENST00000636667 FKBP8Q14318 412 aa3.49□□□□□ -1.85
UBE3A-225ENST00000636667 ZBTB12Q9Y330 459 aaPredicted RBP3.48□□□□□ -1.85
UBE3A-225ENST00000636667 LCE2DQ5TA82 110 aaPredicted RBP3.46□□□□□ -1.86
UBE3A-225ENST00000636667 AKT1S1Q96B36 256 aa3.46□□□□□ -1.86
UBE3A-225ENST00000636667 RBM42Q9BTD8 480 aaKnown RBP3.45□□□□□ -1.86
UBE3A-225ENST00000636667 FXR2P51116 673 aaKnown RBP eCLIP3.43□□□□□ -1.86
UBE3A-225ENST00000636667 PROM2Q8N271 834 aa3.43□□□□□ -1.86
UBE3A-225ENST00000636667 SP7Q8TDD2 431 aaPredicted RBP3.42□□□□□ -1.86
UBE3A-225ENST00000636667 REM2Q8IYK8 340 aaPredicted RBP3.41□□□□□ -1.86
UBE3A-225ENST00000636667 SSUH2Q9Y2M2 353 aa3.41□□□□□ -1.86
UBE3A-225ENST00000636667 OSCARQ8IYS5 282 aa3.41□□□□□ -1.86
UBE3A-225ENST00000636667 SLC24A1O60721 1099 aa3.4□□□□□ -1.87
UBE3A-225ENST00000636667 CHRDL2Q6WN34 429 aa3.39□□□□□ -1.87
UBE3A-225ENST00000636667 PIP4P2Q8N4L2 257 aa3.39□□□□□ -1.87
UBE3A-225ENST00000636667 AMER1Q5JTC6 1135 aaPredicted RBP3.38□□□□□ -1.87
UBE3A-225ENST00000636667 PITPNM1O00562 1244 aa3.38□□□□□ -1.87
UBE3A-225ENST00000636667 SPDYE2BA6NHP3 402 aa3.36□□□□□ -1.87
UBE3A-225ENST00000636667 SPDYE6P0CI01 402 aa3.36□□□□□ -1.87
UBE3A-225ENST00000636667 SPDYE2Q495Y8 402 aa3.36□□□□□ -1.87
UBE3A-225ENST00000636667 IFNLR1Q8IU57 520 aaPredicted RBP3.36□□□□□ -1.87
UBE3A-225ENST00000636667 FBLN2P98095 1184 aa3.35□□□□□ -1.87
UBE3A-225ENST00000636667 PKD2Q13563 968 aa3.33□□□□□ -1.88
UBE3A-225ENST00000636667 C19orf67A6NJJ6 358 aa3.3□□□□□ -1.88
UBE3A-225ENST00000636667 NPM1P06748 294 aaKnown RBP eCLIP3.29□□□□□ -1.88
UBE3A-225ENST00000636667 SPDYE4A6NLX3 237 aa3.28□□□□□ -1.88
UBE3A-225ENST00000636667 SPDYE1Q8NFV5 336 aaPredicted RBP3.28□□□□□ -1.88
UBE3A-225ENST00000636667 EVX2Q03828 476 aa3.28□□□□□ -1.88
UBE3A-225ENST00000636667 ZNF692Q9BU19 519 aaPredicted RBP3.27□□□□□ -1.89
UBE3A-225ENST00000636667 CREBZFQ9NS37 354 aa3.26□□□□□ -1.89
UBE3A-225ENST00000636667 VASPP50552 380 aaPredicted RBP3.25□□□□□ -1.89
UBE3A-225ENST00000636667 KDM2AQ9Y2K7 1162 aa3.25□□□□□ -1.89
UBE3A-225ENST00000636667 MNX1P50219 401 aaPredicted RBP3.24□□□□□ -1.89
UBE3A-225ENST00000636667 PLCB2Q00722 1185 aa3.23□□□□□ -1.89
UBE3A-225ENST00000636667 PABPN1Q86U42 306 aaKnown RBP eCLIP3.23□□□□□ -1.89
UBE3A-225ENST00000636667 PRKAR2AP13861 404 aaKnown RBP3.22□□□□□ -1.89
UBE3A-225ENST00000636667 PRKCSHP14314 528 aaPredicted RBP3.22□□□□□ -1.89
UBE3A-225ENST00000636667 DCAF8L2P0C7V8 631 aa3.21□□□□□ -1.89
UBE3A-225ENST00000636667 RNF25Q96BH1 459 aaPredicted RBP3.21□□□□□ -1.89
UBE3A-225ENST00000636667 CLCN6P51797 869 aa3.21□□□□□ -1.9
UBE3A-225ENST00000636667 RGL2O15211 777 aa3.2□□□□□ -1.9
UBE3A-225ENST00000636667 FARP1Q9Y4F1 1045 aaPredicted RBP3.2□□□□□ -1.9
UBE3A-225ENST00000636667 PRR29P0C7W0 189 aa3.19□□□□□ -1.9
UBE3A-225ENST00000636667 ZNF579Q8NAF0 562 aaKnown RBP3.19□□□□□ -1.9
UBE3A-225ENST00000636667 GABBR2O75899 941 aa3.17□□□□□ -1.9
UBE3A-225ENST00000636667 POTEIP0CG38 1075 aa3.17□□□□□ -1.9
UBE3A-225ENST00000636667 STAG3Q9UJ98 1225 aa3.16□□□□□ -1.9
UBE3A-225ENST00000636667 NKX1-1Q15270 411 aaPredicted RBP3.16□□□□□ -1.9
UBE3A-225ENST00000636667 CHADLQ6NUI6 762 aa3.16□□□□□ -1.9
UBE3A-225ENST00000636667 CLEC11AQ9Y240 323 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms