RNA–Protein interactions for RNA: ENST00000635702.1

LINC01709-202, Transcript of long intergenic non-protein coding RNA 1709, humanhuman

TSL 5 BASIC

Gene LINC01709, Length 1,204 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01709-202ENST00000635702 AEBP2Q6ZN18 517 aaPredicted RBP34.42■■■■□ 3.1
LINC01709-202ENST00000635702 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
LINC01709-202ENST00000635702 SENP3Q9H4L4 574 aaPredicted RBP29.33■■■□□ 2.29
LINC01709-202ENST00000635702 PHF23Q9BUL5 403 aaPredicted RBP28.92■■■□□ 2.22
LINC01709-202ENST00000635702 FOXD1Q16676 465 aa27.43■■□□□ 1.98
LINC01709-202ENST00000635702 POTEDQ86YR6 584 aa25.75■■□□□ 1.71
LINC01709-202ENST00000635702 MSH5O43196 834 aa25.73■■□□□ 1.71
LINC01709-202ENST00000635702 PLPPR3Q6T4P5 718 aa25.61■■□□□ 1.69
LINC01709-202ENST00000635702 PIAS4Q8N2W9 510 aaPredicted RBP25.48■■□□□ 1.67
LINC01709-202ENST00000635702 PPP6R1Q9UPN7 881 aa25.41■■□□□ 1.66
LINC01709-202ENST00000635702 ADRA2BP18089 450 aa25.26■■□□□ 1.63
LINC01709-202ENST00000635702 MAPK8IP2Q13387 824 aaPredicted RBP23.32■■□□□ 1.32
LINC01709-202ENST00000635702 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
LINC01709-202ENST00000635702 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
LINC01709-202ENST00000635702 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
LINC01709-202ENST00000635702 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
LINC01709-202ENST00000635702 CACNB1Q02641 598 aaPredicted RBP22.26■■□□□ 1.15
LINC01709-202ENST00000635702 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
LINC01709-202ENST00000635702 CNKSR2Q8WXI2 1034 aa22.07■■□□□ 1.12
LINC01709-202ENST00000635702 RNF39Q9H2S5 420 aa21.98■■□□□ 1.11
LINC01709-202ENST00000635702 RNF216Q9NWF9 866 aaPredicted RBP21.98■■□□□ 1.11
LINC01709-202ENST00000635702 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
LINC01709-202ENST00000635702 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
LINC01709-202ENST00000635702 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.01
LINC01709-202ENST00000635702 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
LINC01709-202ENST00000635702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.11■□□□□ 0.97
LINC01709-202ENST00000635702 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
LINC01709-202ENST00000635702 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
LINC01709-202ENST00000635702 KCNA4P22459 653 aa20.46■□□□□ 0.87
LINC01709-202ENST00000635702 DSG3P32926 999 aa20.46■□□□□ 0.87
LINC01709-202ENST00000635702 CAPN15O75808 1086 aa20.41■□□□□ 0.86
LINC01709-202ENST00000635702 SLC4A2P04920 1241 aa20.35■□□□□ 0.85
LINC01709-202ENST00000635702 POTEHQ6S545 545 aa20.08■□□□□ 0.81
LINC01709-202ENST00000635702 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
LINC01709-202ENST00000635702 APLP2Q06481 763 aa19.98■□□□□ 0.79
LINC01709-202ENST00000635702 ZNF219Q9P2Y4 722 aaPredicted RBP19.97■□□□□ 0.79
LINC01709-202ENST00000635702 ABCB7O75027 752 aa19.94■□□□□ 0.78
LINC01709-202ENST00000635702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
LINC01709-202ENST00000635702 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
LINC01709-202ENST00000635702 SAMD1Q6SPF0 538 aaPredicted RBP19.81■□□□□ 0.76
LINC01709-202ENST00000635702 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
LINC01709-202ENST00000635702 RBM42Q9BTD8 480 aaKnown RBP19.47■□□□□ 0.71
LINC01709-202ENST00000635702 POLA2Q14181 598 aa19.43■□□□□ 0.7
LINC01709-202ENST00000635702 CHRDL2Q6WN34 429 aa19.21■□□□□ 0.67
LINC01709-202ENST00000635702 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
LINC01709-202ENST00000635702 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
LINC01709-202ENST00000635702 FOXD4L1Q9NU39 408 aa19.17■□□□□ 0.66
LINC01709-202ENST00000635702 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
LINC01709-202ENST00000635702 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
LINC01709-202ENST00000635702 ZBTB22O15209 634 aa18.85■□□□□ 0.61
LINC01709-202ENST00000635702 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
LINC01709-202ENST00000635702 REM2Q8IYK8 340 aaPredicted RBP18.82■□□□□ 0.6
LINC01709-202ENST00000635702 PIP4P2Q8N4L2 257 aa18.7■□□□□ 0.58
LINC01709-202ENST00000635702 SP7Q8TDD2 431 aaPredicted RBP18.66■□□□□ 0.58
LINC01709-202ENST00000635702 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
LINC01709-202ENST00000635702 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
LINC01709-202ENST00000635702 FXR2P51116 673 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC01709-202ENST00000635702 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
LINC01709-202ENST00000635702 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
LINC01709-202ENST00000635702 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
LINC01709-202ENST00000635702 HAX1O00165 279 aa18.38■□□□□ 0.53
LINC01709-202ENST00000635702 FBLN2P98095 1184 aa18.35■□□□□ 0.53
LINC01709-202ENST00000635702 MKRN4PQ13434 485 aaPredicted RBP18.3■□□□□ 0.52
LINC01709-202ENST00000635702 EVX2Q03828 476 aa18.24■□□□□ 0.51
LINC01709-202ENST00000635702 SSUH2Q9Y2M2 353 aa18.17■□□□□ 0.5
LINC01709-202ENST00000635702 SPDYE1Q8NFV5 336 aaPredicted RBP18.14■□□□□ 0.49
LINC01709-202ENST00000635702 PRKAR2AP13861 404 aaKnown RBP18.1■□□□□ 0.49
LINC01709-202ENST00000635702 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
LINC01709-202ENST00000635702 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
LINC01709-202ENST00000635702 C19orf67A6NJJ6 358 aa17.97■□□□□ 0.47
LINC01709-202ENST00000635702 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
LINC01709-202ENST00000635702 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC01709-202ENST00000635702 GABBR2O75899 941 aa17.77■□□□□ 0.44
LINC01709-202ENST00000635702 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
LINC01709-202ENST00000635702 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
LINC01709-202ENST00000635702 FARP1Q9Y4F1 1045 aaPredicted RBP17.55■□□□□ 0.4
LINC01709-202ENST00000635702 CD44P16070 742 aaKnown RBP17.5■□□□□ 0.39
LINC01709-202ENST00000635702 LHX8Q68G74 356 aa17.49■□□□□ 0.39
LINC01709-202ENST00000635702 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
LINC01709-202ENST00000635702 CLCN6P51797 869 aa17.33■□□□□ 0.36
LINC01709-202ENST00000635702 CREBZFQ9NS37 354 aa17.32■□□□□ 0.36
LINC01709-202ENST00000635702 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
LINC01709-202ENST00000635702 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
LINC01709-202ENST00000635702 ZRANB1Q9UGI0 708 aa17.19■□□□□ 0.34
LINC01709-202ENST00000635702 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
LINC01709-202ENST00000635702 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
LINC01709-202ENST00000635702 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
LINC01709-202ENST00000635702 GALR2O43603 387 aaPredicted RBP17.07■□□□□ 0.32
LINC01709-202ENST00000635702 MNX1P50219 401 aaPredicted RBP17.02■□□□□ 0.32
LINC01709-202ENST00000635702 PHF12Q96QT6 1004 aa16.96■□□□□ 0.31
LINC01709-202ENST00000635702 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
LINC01709-202ENST00000635702 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC01709-202ENST00000635702 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
LINC01709-202ENST00000635702 OTUD5Q96G74 571 aa16.84■□□□□ 0.29
LINC01709-202ENST00000635702 PROM2Q8N271 834 aa16.82■□□□□ 0.28
LINC01709-202ENST00000635702 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
LINC01709-202ENST00000635702 MS4A3Q96HJ5 214 aa16.73■□□□□ 0.27
LINC01709-202ENST00000635702 ASTLQ6HA08 431 aaPredicted RBP16.71■□□□□ 0.27
LINC01709-202ENST00000635702 ATMINO43313 823 aaPredicted RBP16.65■□□□□ 0.26
LINC01709-202ENST00000635702 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms