RNA–Protein interactions for RNA: ENST00000635702.1

LINC01709-202, Transcript of long intergenic non-protein coding RNA 1709, humanhuman

TSL 5 BASIC

Gene LINC01709, Length 1,204 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01709-202ENST00000635702 AEBP2Q6ZN18 517 aaPredicted RBP34.42■■■■□ 3.1
LINC01709-202ENST00000635702 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
LINC01709-202ENST00000635702 SENP3Q9H4L4 574 aaPredicted RBP29.33■■■□□ 2.29
LINC01709-202ENST00000635702 PHF23Q9BUL5 403 aaPredicted RBP28.92■■■□□ 2.22
LINC01709-202ENST00000635702 FOXD1Q16676 465 aa27.43■■□□□ 1.98
LINC01709-202ENST00000635702 POTEDQ86YR6 584 aa25.75■■□□□ 1.71
LINC01709-202ENST00000635702 MSH5O43196 834 aa25.73■■□□□ 1.71
LINC01709-202ENST00000635702 PLPPR3Q6T4P5 718 aa25.61■■□□□ 1.69
LINC01709-202ENST00000635702 PIAS4Q8N2W9 510 aaPredicted RBP25.48■■□□□ 1.67
LINC01709-202ENST00000635702 PPP6R1Q9UPN7 881 aa25.41■■□□□ 1.66
LINC01709-202ENST00000635702 ADRA2BP18089 450 aa25.26■■□□□ 1.63
LINC01709-202ENST00000635702 MAPK8IP2Q13387 824 aaPredicted RBP23.32■■□□□ 1.32
LINC01709-202ENST00000635702 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
LINC01709-202ENST00000635702 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
LINC01709-202ENST00000635702 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
LINC01709-202ENST00000635702 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
LINC01709-202ENST00000635702 CACNB1Q02641 598 aaPredicted RBP22.26■■□□□ 1.15
LINC01709-202ENST00000635702 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
LINC01709-202ENST00000635702 CNKSR2Q8WXI2 1034 aa22.07■■□□□ 1.12
LINC01709-202ENST00000635702 RNF39Q9H2S5 420 aa21.98■■□□□ 1.11
LINC01709-202ENST00000635702 RNF216Q9NWF9 866 aaPredicted RBP21.98■■□□□ 1.11
LINC01709-202ENST00000635702 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
LINC01709-202ENST00000635702 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
LINC01709-202ENST00000635702 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.01
LINC01709-202ENST00000635702 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
LINC01709-202ENST00000635702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.11■□□□□ 0.97
LINC01709-202ENST00000635702 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
LINC01709-202ENST00000635702 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
LINC01709-202ENST00000635702 KCNA4P22459 653 aa20.46■□□□□ 0.87
LINC01709-202ENST00000635702 DSG3P32926 999 aa20.46■□□□□ 0.87
LINC01709-202ENST00000635702 CAPN15O75808 1086 aa20.41■□□□□ 0.86
LINC01709-202ENST00000635702 SLC4A2P04920 1241 aa20.35■□□□□ 0.85
LINC01709-202ENST00000635702 POTEHQ6S545 545 aa20.08■□□□□ 0.81
LINC01709-202ENST00000635702 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
LINC01709-202ENST00000635702 APLP2Q06481 763 aa19.98■□□□□ 0.79
LINC01709-202ENST00000635702 ZNF219Q9P2Y4 722 aaPredicted RBP19.97■□□□□ 0.79
LINC01709-202ENST00000635702 ABCB7O75027 752 aa19.94■□□□□ 0.78
LINC01709-202ENST00000635702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
LINC01709-202ENST00000635702 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
LINC01709-202ENST00000635702 SAMD1Q6SPF0 538 aaPredicted RBP19.81■□□□□ 0.76
LINC01709-202ENST00000635702 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
LINC01709-202ENST00000635702 RBM42Q9BTD8 480 aaKnown RBP19.47■□□□□ 0.71
LINC01709-202ENST00000635702 POLA2Q14181 598 aa19.43■□□□□ 0.7
LINC01709-202ENST00000635702 CHRDL2Q6WN34 429 aa19.21■□□□□ 0.67
LINC01709-202ENST00000635702 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
LINC01709-202ENST00000635702 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
LINC01709-202ENST00000635702 FOXD4L1Q9NU39 408 aa19.17■□□□□ 0.66
LINC01709-202ENST00000635702 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
LINC01709-202ENST00000635702 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
LINC01709-202ENST00000635702 ZBTB22O15209 634 aa18.85■□□□□ 0.61
LINC01709-202ENST00000635702 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
LINC01709-202ENST00000635702 REM2Q8IYK8 340 aaPredicted RBP18.82■□□□□ 0.6
LINC01709-202ENST00000635702 PIP4P2Q8N4L2 257 aa18.7■□□□□ 0.58
LINC01709-202ENST00000635702 SP7Q8TDD2 431 aaPredicted RBP18.66■□□□□ 0.58
LINC01709-202ENST00000635702 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
LINC01709-202ENST00000635702 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
LINC01709-202ENST00000635702 FXR2P51116 673 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC01709-202ENST00000635702 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
LINC01709-202ENST00000635702 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
LINC01709-202ENST00000635702 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
LINC01709-202ENST00000635702 HAX1O00165 279 aa18.38■□□□□ 0.53
LINC01709-202ENST00000635702 FBLN2P98095 1184 aa18.35■□□□□ 0.53
LINC01709-202ENST00000635702 MKRN4PQ13434 485 aaPredicted RBP18.3■□□□□ 0.52
LINC01709-202ENST00000635702 EVX2Q03828 476 aa18.24■□□□□ 0.51
LINC01709-202ENST00000635702 SSUH2Q9Y2M2 353 aa18.17■□□□□ 0.5
LINC01709-202ENST00000635702 SPDYE1Q8NFV5 336 aaPredicted RBP18.14■□□□□ 0.49
LINC01709-202ENST00000635702 PRKAR2AP13861 404 aaKnown RBP18.1■□□□□ 0.49
LINC01709-202ENST00000635702 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
LINC01709-202ENST00000635702 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
LINC01709-202ENST00000635702 C19orf67A6NJJ6 358 aa17.97■□□□□ 0.47
LINC01709-202ENST00000635702 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
LINC01709-202ENST00000635702 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC01709-202ENST00000635702 GABBR2O75899 941 aa17.77■□□□□ 0.44
LINC01709-202ENST00000635702 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
LINC01709-202ENST00000635702 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
LINC01709-202ENST00000635702 FARP1Q9Y4F1 1045 aaPredicted RBP17.55■□□□□ 0.4
LINC01709-202ENST00000635702 CD44P16070 742 aaKnown RBP17.5■□□□□ 0.39
LINC01709-202ENST00000635702 LHX8Q68G74 356 aa17.49■□□□□ 0.39
LINC01709-202ENST00000635702 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
LINC01709-202ENST00000635702 CLCN6P51797 869 aa17.33■□□□□ 0.36
LINC01709-202ENST00000635702 CREBZFQ9NS37 354 aa17.32■□□□□ 0.36
LINC01709-202ENST00000635702 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
LINC01709-202ENST00000635702 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
LINC01709-202ENST00000635702 ZRANB1Q9UGI0 708 aa17.19■□□□□ 0.34
LINC01709-202ENST00000635702 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
LINC01709-202ENST00000635702 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
LINC01709-202ENST00000635702 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
LINC01709-202ENST00000635702 GALR2O43603 387 aaPredicted RBP17.07■□□□□ 0.32
LINC01709-202ENST00000635702 MNX1P50219 401 aaPredicted RBP17.02■□□□□ 0.32
LINC01709-202ENST00000635702 PHF12Q96QT6 1004 aa16.96■□□□□ 0.31
LINC01709-202ENST00000635702 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
LINC01709-202ENST00000635702 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC01709-202ENST00000635702 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
LINC01709-202ENST00000635702 OTUD5Q96G74 571 aa16.84■□□□□ 0.29
LINC01709-202ENST00000635702 PROM2Q8N271 834 aa16.82■□□□□ 0.28
LINC01709-202ENST00000635702 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
LINC01709-202ENST00000635702 MS4A3Q96HJ5 214 aa16.73■□□□□ 0.27
LINC01709-202ENST00000635702 ASTLQ6HA08 431 aaPredicted RBP16.71■□□□□ 0.27
LINC01709-202ENST00000635702 ATMINO43313 823 aaPredicted RBP16.65■□□□□ 0.26
LINC01709-202ENST00000635702 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms