RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 AEBP2Q6ZN18 517 aaPredicted RBP38.17■■■■□ 3.7
SMARCA2-245ENST00000635688 CHIC1Q5VXU3 224 aa36.21■■■■□ 3.39
SMARCA2-245ENST00000635688 SENP3Q9H4L4 574 aaPredicted RBP32.35■■■□□ 2.77
SMARCA2-245ENST00000635688 PHF23Q9BUL5 403 aaPredicted RBP32.04■■■□□ 2.72
SMARCA2-245ENST00000635688 FOXD1Q16676 465 aa30.27■■■□□ 2.44
SMARCA2-245ENST00000635688 PLPPR3Q6T4P5 718 aa28.91■■■□□ 2.22
SMARCA2-245ENST00000635688 PPP6R1Q9UPN7 881 aa28.45■■■□□ 2.14
SMARCA2-245ENST00000635688 ADRA2BP18089 450 aa28.32■■■□□ 2.12
SMARCA2-245ENST00000635688 PIAS4Q8N2W9 510 aaPredicted RBP28.25■■■□□ 2.11
SMARCA2-245ENST00000635688 MSH5O43196 834 aa28.14■■■□□ 2.1
SMARCA2-245ENST00000635688 POTEDQ86YR6 584 aa27.45■■□□□ 1.98
SMARCA2-245ENST00000635688 MAPK8IP2Q13387 824 aaPredicted RBP26.02■■□□□ 1.76
SMARCA2-245ENST00000635688 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
SMARCA2-245ENST00000635688 SCAF1Q9H7N4 1312 aaKnown RBP25.7■■□□□ 1.71
SMARCA2-245ENST00000635688 PPP4R3CPQ6ZMV5 832 aa25.42■■□□□ 1.66
SMARCA2-245ENST00000635688 CNKSR2Q8WXI2 1034 aa24.86■■□□□ 1.57
SMARCA2-245ENST00000635688 HOXD11P31277 338 aaPredicted RBP24.81■■□□□ 1.56
SMARCA2-245ENST00000635688 DCAF8L1A6NGE4 600 aa24.65■■□□□ 1.54
SMARCA2-245ENST00000635688 RNF216Q9NWF9 866 aaPredicted RBP24.62■■□□□ 1.53
SMARCA2-245ENST00000635688 NCBP3Q53F19 620 aaKnown RBP24.34■■□□□ 1.49
SMARCA2-245ENST00000635688 CACNB1Q02641 598 aaPredicted RBP24.15■■□□□ 1.46
SMARCA2-245ENST00000635688 NPM3O75607 178 aaKnown RBP24.14■■□□□ 1.45
SMARCA2-245ENST00000635688 RNF39Q9H2S5 420 aa24.11■■□□□ 1.45
SMARCA2-245ENST00000635688 DNAJC5BQ9UF47 199 aa23.83■■□□□ 1.41
SMARCA2-245ENST00000635688 KCNA4P22459 653 aa23.8■■□□□ 1.4
SMARCA2-245ENST00000635688 C1QBPQ07021 282 aaKnown RBP23.69■■□□□ 1.38
SMARCA2-245ENST00000635688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.6■■□□□ 1.37
SMARCA2-245ENST00000635688 U3KPZ7 1027 aaPredicted RBP23.2■■□□□ 1.3
SMARCA2-245ENST00000635688 SLC4A2P04920 1241 aa23.08■■□□□ 1.29
SMARCA2-245ENST00000635688 SPINK5Q9NQ38 1064 aaPredicted RBP22.87■■□□□ 1.25
SMARCA2-245ENST00000635688 CAPN15O75808 1086 aa22.73■■□□□ 1.23
SMARCA2-245ENST00000635688 DSG3P32926 999 aa22.62■■□□□ 1.21
SMARCA2-245ENST00000635688 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
SMARCA2-245ENST00000635688 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
SMARCA2-245ENST00000635688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
SMARCA2-245ENST00000635688 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
SMARCA2-245ENST00000635688 APLP2Q06481 763 aa22.32■■□□□ 1.16
SMARCA2-245ENST00000635688 ABCB7O75027 752 aa22.3■■□□□ 1.16
SMARCA2-245ENST00000635688 SAMD1Q6SPF0 538 aaPredicted RBP22.3■■□□□ 1.16
SMARCA2-245ENST00000635688 ZNF219Q9P2Y4 722 aaPredicted RBP22.28■■□□□ 1.16
SMARCA2-245ENST00000635688 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
SMARCA2-245ENST00000635688 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.13
SMARCA2-245ENST00000635688 ZBTB22O15209 634 aa21.95■■□□□ 1.1
SMARCA2-245ENST00000635688 ATF5Q9Y2D1 282 aaPredicted RBP21.9■■□□□ 1.1
SMARCA2-245ENST00000635688 POLA2Q14181 598 aa21.85■■□□□ 1.09
SMARCA2-245ENST00000635688 POTEHQ6S545 545 aa21.5■■□□□ 1.03
SMARCA2-245ENST00000635688 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
SMARCA2-245ENST00000635688 ATXN8OSP0DMR3 200 aa21.33■■□□□ 1.01
SMARCA2-245ENST00000635688 ZBTB12Q9Y330 459 aaPredicted RBP21.25■□□□□ 0.99
SMARCA2-245ENST00000635688 OSCARQ8IYS5 282 aa21.16■□□□□ 0.98
SMARCA2-245ENST00000635688 CHRDL2Q6WN34 429 aa21.04■□□□□ 0.96
SMARCA2-245ENST00000635688 AKT1S1Q96B36 256 aa21.02■□□□□ 0.96
SMARCA2-245ENST00000635688 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
SMARCA2-245ENST00000635688 REM2Q8IYK8 340 aaPredicted RBP20.89■□□□□ 0.93
SMARCA2-245ENST00000635688 MKRN4PQ13434 485 aaPredicted RBP20.87■□□□□ 0.93
SMARCA2-245ENST00000635688 FBLN2P98095 1184 aa20.81■□□□□ 0.92
SMARCA2-245ENST00000635688 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
SMARCA2-245ENST00000635688 PITPNM1O00562 1244 aa20.7■□□□□ 0.9
SMARCA2-245ENST00000635688 SPDYE2BA6NHP3 402 aa20.68■□□□□ 0.9
SMARCA2-245ENST00000635688 SPDYE6P0CI01 402 aa20.68■□□□□ 0.9
SMARCA2-245ENST00000635688 SPDYE2Q495Y8 402 aa20.68■□□□□ 0.9
SMARCA2-245ENST00000635688 PIP4P2Q8N4L2 257 aa20.6■□□□□ 0.89
SMARCA2-245ENST00000635688 ZNF692Q9BU19 519 aaPredicted RBP20.48■□□□□ 0.87
SMARCA2-245ENST00000635688 SSUH2Q9Y2M2 353 aa20.48■□□□□ 0.87
SMARCA2-245ENST00000635688 FXR2P51116 673 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMARCA2-245ENST00000635688 CLEC11AQ9Y240 323 aa20.3■□□□□ 0.84
SMARCA2-245ENST00000635688 SPDYE1Q8NFV5 336 aaPredicted RBP20.28■□□□□ 0.84
SMARCA2-245ENST00000635688 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMARCA2-245ENST00000635688 SP7Q8TDD2 431 aaPredicted RBP20.18■□□□□ 0.82
SMARCA2-245ENST00000635688 HAX1O00165 279 aa20.15■□□□□ 0.82
SMARCA2-245ENST00000635688 PRKAR2AP13861 404 aaKnown RBP20.13■□□□□ 0.81
SMARCA2-245ENST00000635688 EVX2Q03828 476 aa20.06■□□□□ 0.8
SMARCA2-245ENST00000635688 CHADLQ6NUI6 762 aa19.99■□□□□ 0.79
SMARCA2-245ENST00000635688 PRR29P0C7W0 189 aa19.95■□□□□ 0.78
SMARCA2-245ENST00000635688 SPDYE4A6NLX3 237 aa19.82■□□□□ 0.76
SMARCA2-245ENST00000635688 C19orf67A6NJJ6 358 aa19.81■□□□□ 0.76
SMARCA2-245ENST00000635688 FARP1Q9Y4F1 1045 aaPredicted RBP19.63■□□□□ 0.73
SMARCA2-245ENST00000635688 CREBZFQ9NS37 354 aa19.56■□□□□ 0.72
SMARCA2-245ENST00000635688 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
SMARCA2-245ENST00000635688 GABBR2O75899 941 aa19.51■□□□□ 0.71
SMARCA2-245ENST00000635688 CD44P16070 742 aaKnown RBP19.48■□□□□ 0.71
SMARCA2-245ENST00000635688 PROM2Q8N271 834 aa19.4■□□□□ 0.7
SMARCA2-245ENST00000635688 MNX1P50219 401 aaPredicted RBP19.27■□□□□ 0.68
SMARCA2-245ENST00000635688 ZRANB1Q9UGI0 708 aa19.23■□□□□ 0.67
SMARCA2-245ENST00000635688 POTEIP0CG38 1075 aa19.18■□□□□ 0.66
SMARCA2-245ENST00000635688 ZNF579Q8NAF0 562 aaKnown RBP19.17■□□□□ 0.66
SMARCA2-245ENST00000635688 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
SMARCA2-245ENST00000635688 NPM1P06748 294 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMARCA2-245ENST00000635688 CLCN6P51797 869 aa19.04■□□□□ 0.64
SMARCA2-245ENST00000635688 GALR2O43603 387 aaPredicted RBP19.02■□□□□ 0.64
SMARCA2-245ENST00000635688 PHF12Q96QT6 1004 aa19.02■□□□□ 0.64
SMARCA2-245ENST00000635688 PAK3O75914 559 aaPredicted RBP18.97■□□□□ 0.63
SMARCA2-245ENST00000635688 FKBP8Q14318 412 aa18.95■□□□□ 0.62
SMARCA2-245ENST00000635688 LHX8Q68G74 356 aa18.93■□□□□ 0.62
SMARCA2-245ENST00000635688 DCBLD2Q96PD2 775 aa18.93■□□□□ 0.62
SMARCA2-245ENST00000635688 MIER1Q8N108 512 aa18.88■□□□□ 0.61
SMARCA2-245ENST00000635688 TSPYL2Q9H2G4 693 aaPredicted RBP18.83■□□□□ 0.6
SMARCA2-245ENST00000635688 MS4A3Q96HJ5 214 aa18.75■□□□□ 0.59
SMARCA2-245ENST00000635688 CCDC61Q9Y6R9 512 aa18.75■□□□□ 0.59
SMARCA2-245ENST00000635688 RASEFQ8IZ41 740 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms