RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-238ENST00000635273 AEBP2Q6ZN18 517 aaPredicted RBP30.71■■■□□ 2.51
SMARCA2-238ENST00000635273 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
SMARCA2-238ENST00000635273 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
SMARCA2-238ENST00000635273 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
SMARCA2-238ENST00000635273 FOXD1Q16676 465 aa24.72■■□□□ 1.55
SMARCA2-238ENST00000635273 POTEDQ86YR6 584 aa24.58■■□□□ 1.53
SMARCA2-238ENST00000635273 MSH5O43196 834 aa23.7■■□□□ 1.38
SMARCA2-238ENST00000635273 PIAS4Q8N2W9 510 aaPredicted RBP22.98■■□□□ 1.27
SMARCA2-238ENST00000635273 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
SMARCA2-238ENST00000635273 PPP6R1Q9UPN7 881 aa22.3■■□□□ 1.16
SMARCA2-238ENST00000635273 ADRA2BP18089 450 aa22.23■■□□□ 1.15
SMARCA2-238ENST00000635273 CACNB1Q02641 598 aaPredicted RBP20.88■□□□□ 0.93
SMARCA2-238ENST00000635273 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
SMARCA2-238ENST00000635273 MAPK8IP2Q13387 824 aaPredicted RBP20.66■□□□□ 0.9
SMARCA2-238ENST00000635273 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
SMARCA2-238ENST00000635273 DCAF8L1A6NGE4 600 aa20.12■□□□□ 0.81
SMARCA2-238ENST00000635273 RNF39Q9H2S5 420 aa20.02■□□□□ 0.8
SMARCA2-238ENST00000635273 KCNA4P22459 653 aa19.89■□□□□ 0.77
SMARCA2-238ENST00000635273 C1QBPQ07021 282 aaKnown RBP19.76■□□□□ 0.75
SMARCA2-238ENST00000635273 HOXD11P31277 338 aaPredicted RBP19.71■□□□□ 0.75
SMARCA2-238ENST00000635273 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
SMARCA2-238ENST00000635273 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
SMARCA2-238ENST00000635273 RNF216Q9NWF9 866 aaPredicted RBP19.35■□□□□ 0.69
SMARCA2-238ENST00000635273 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
SMARCA2-238ENST00000635273 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
SMARCA2-238ENST00000635273 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
SMARCA2-238ENST00000635273 POTEHQ6S545 545 aa19.13■□□□□ 0.65
SMARCA2-238ENST00000635273 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
SMARCA2-238ENST00000635273 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
SMARCA2-238ENST00000635273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
SMARCA2-238ENST00000635273 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
SMARCA2-238ENST00000635273 DSG3P32926 999 aa18.41■□□□□ 0.54
SMARCA2-238ENST00000635273 CAPN15O75808 1086 aa18.38■□□□□ 0.53
SMARCA2-238ENST00000635273 ZBTB22O15209 634 aa18.34■□□□□ 0.53
SMARCA2-238ENST00000635273 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
SMARCA2-238ENST00000635273 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
SMARCA2-238ENST00000635273 FOXD4L1Q9NU39 408 aa18.06■□□□□ 0.48
SMARCA2-238ENST00000635273 APLP2Q06481 763 aa17.93■□□□□ 0.46
SMARCA2-238ENST00000635273 ZNF219Q9P2Y4 722 aaPredicted RBP17.87■□□□□ 0.45
SMARCA2-238ENST00000635273 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
SMARCA2-238ENST00000635273 ABCB7O75027 752 aa17.79■□□□□ 0.44
SMARCA2-238ENST00000635273 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
SMARCA2-238ENST00000635273 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
SMARCA2-238ENST00000635273 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
SMARCA2-238ENST00000635273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
SMARCA2-238ENST00000635273 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
SMARCA2-238ENST00000635273 SP7Q8TDD2 431 aaPredicted RBP17.51■□□□□ 0.39
SMARCA2-238ENST00000635273 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
SMARCA2-238ENST00000635273 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
SMARCA2-238ENST00000635273 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
SMARCA2-238ENST00000635273 POLA2Q14181 598 aa17.09■□□□□ 0.33
SMARCA2-238ENST00000635273 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
SMARCA2-238ENST00000635273 HAX1O00165 279 aa16.99■□□□□ 0.31
SMARCA2-238ENST00000635273 FKBP8Q14318 412 aa16.97■□□□□ 0.31
SMARCA2-238ENST00000635273 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
SMARCA2-238ENST00000635273 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
SMARCA2-238ENST00000635273 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-238ENST00000635273 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
SMARCA2-238ENST00000635273 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-238ENST00000635273 AMER1Q5JTC6 1135 aaPredicted RBP16.79■□□□□ 0.28
SMARCA2-238ENST00000635273 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMARCA2-238ENST00000635273 PITPNM1O00562 1244 aa16.68■□□□□ 0.26
SMARCA2-238ENST00000635273 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
SMARCA2-238ENST00000635273 EVX2Q03828 476 aa16.5■□□□□ 0.23
SMARCA2-238ENST00000635273 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
SMARCA2-238ENST00000635273 LHX8Q68G74 356 aa16.4■□□□□ 0.22
SMARCA2-238ENST00000635273 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
SMARCA2-238ENST00000635273 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
SMARCA2-238ENST00000635273 C19orf67A6NJJ6 358 aa16.23■□□□□ 0.19
SMARCA2-238ENST00000635273 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
SMARCA2-238ENST00000635273 GABBR2O75899 941 aa16.21■□□□□ 0.19
SMARCA2-238ENST00000635273 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
SMARCA2-238ENST00000635273 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
SMARCA2-238ENST00000635273 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
SMARCA2-238ENST00000635273 PLSCR2Q9NRY7 297 aa16.18■□□□□ 0.18
SMARCA2-238ENST00000635273 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
SMARCA2-238ENST00000635273 FBLN2P98095 1184 aa16.13■□□□□ 0.17
SMARCA2-238ENST00000635273 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
SMARCA2-238ENST00000635273 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
SMARCA2-238ENST00000635273 PROM2Q8N271 834 aa16.08■□□□□ 0.16
SMARCA2-238ENST00000635273 VASPP50552 380 aaPredicted RBP15.91■□□□□ 0.14
SMARCA2-238ENST00000635273 CLCN6P51797 869 aa15.84■□□□□ 0.13
SMARCA2-238ENST00000635273 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
SMARCA2-238ENST00000635273 ZNF692Q9BU19 519 aaPredicted RBP15.8■□□□□ 0.12
SMARCA2-238ENST00000635273 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
SMARCA2-238ENST00000635273 SSUH2Q9Y2M2 353 aa15.78■□□□□ 0.12
SMARCA2-238ENST00000635273 POTEIP0CG38 1075 aa15.76■□□□□ 0.11
SMARCA2-238ENST00000635273 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
SMARCA2-238ENST00000635273 CD44P16070 742 aaKnown RBP15.73■□□□□ 0.11
SMARCA2-238ENST00000635273 DCBLD2Q96PD2 775 aa15.7■□□□□ 0.1
SMARCA2-238ENST00000635273 PKD2Q13563 968 aa15.55■□□□□ 0.08
SMARCA2-238ENST00000635273 FARP1Q9Y4F1 1045 aaPredicted RBP15.55■□□□□ 0.08
SMARCA2-238ENST00000635273 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
SMARCA2-238ENST00000635273 POTEMA6NI47 508 aa15.5■□□□□ 0.07
SMARCA2-238ENST00000635273 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMARCA2-238ENST00000635273 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
SMARCA2-238ENST00000635273 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
SMARCA2-238ENST00000635273 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
SMARCA2-238ENST00000635273 ZNF579Q8NAF0 562 aaKnown RBP15.44■□□□□ 0.06
SMARCA2-238ENST00000635273 SPOCK2Q92563 424 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms