RNA–Protein interactions for RNA: ENST00000629846.2

PFKM-232, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4 BASIC

Gene PFKM, Length 381 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-232ENST00000629846 NISCHQ9Y2I1 1504 aa15.09■□□□□ 0.01
PFKM-232ENST00000629846 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
PFKM-232ENST00000629846 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
PFKM-232ENST00000629846 SHROOM4Q9ULL8 1493 aa12.54□□□□□ -0.4
PFKM-232ENST00000629846 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
PFKM-232ENST00000629846 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
PFKM-232ENST00000629846 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
PFKM-232ENST00000629846 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
PFKM-232ENST00000629846 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
PFKM-232ENST00000629846 NACADO15069 1562 aa12.08□□□□□ -0.48
PFKM-232ENST00000629846 ABCC9O60706 1549 aa11.98□□□□□ -0.49
PFKM-232ENST00000629846 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.49
PFKM-232ENST00000629846 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
PFKM-232ENST00000629846 RB1CC1Q8TDY2 1594 aa11.89□□□□□ -0.51
PFKM-232ENST00000629846 RSF1Q96T23 1441 aaPredicted RBP11.83□□□□□ -0.52
PFKM-232ENST00000629846 BAZ1AQ9NRL2 1556 aaPredicted RBP11.66□□□□□ -0.54
PFKM-232ENST00000629846 CECR2Q9BXF3 1484 aa11.64□□□□□ -0.55
PFKM-232ENST00000629846 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
PFKM-232ENST00000629846 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
PFKM-232ENST00000629846 WIZO95785 1651 aa11.55□□□□□ -0.56
PFKM-232ENST00000629846 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
PFKM-232ENST00000629846 SMARCA4P51532 1647 aa11.5□□□□□ -0.57
PFKM-232ENST00000629846 LOC105371045A0A1W2PR82 267 aa11.5□□□□□ -0.57
PFKM-232ENST00000629846 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
PFKM-232ENST00000629846 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
PFKM-232ENST00000629846 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
PFKM-232ENST00000629846 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
PFKM-232ENST00000629846 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
PFKM-232ENST00000629846 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
PFKM-232ENST00000629846 FAM9AQ8IZU1 332 aaPredicted RBP11.36□□□□□ -0.59
PFKM-232ENST00000629846 HRCP23327 699 aa11.35□□□□□ -0.59
PFKM-232ENST00000629846 SMARCA2P51531 1590 aa11.35□□□□□ -0.59
PFKM-232ENST00000629846 PEG3Q9GZU2 1588 aa11.35□□□□□ -0.59
PFKM-232ENST00000629846 EIF4G1Q04637 1599 aaKnown RBP11.3□□□□□ -0.6
PFKM-232ENST00000629846 EEA1Q15075 1411 aa11.27□□□□□ -0.6
PFKM-232ENST00000629846 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
PFKM-232ENST00000629846 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
PFKM-232ENST00000629846 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
PFKM-232ENST00000629846 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
PFKM-232ENST00000629846 ABCC8Q09428 1581 aa11.18□□□□□ -0.62
PFKM-232ENST00000629846 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
PFKM-232ENST00000629846 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
PFKM-232ENST00000629846 NCAPD3P42695 1498 aa11.13□□□□□ -0.63
PFKM-232ENST00000629846 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
PFKM-232ENST00000629846 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
PFKM-232ENST00000629846 UBTFP17480 764 aaKnown RBP11.1□□□□□ -0.63
PFKM-232ENST00000629846 SOGA1O94964 1423 aa11.09□□□□□ -0.63
PFKM-232ENST00000629846 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
PFKM-232ENST00000629846 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
PFKM-232ENST00000629846 CEP162Q5TB80 1403 aa11.03□□□□□ -0.64
PFKM-232ENST00000629846 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
PFKM-232ENST00000629846 KIF21BO75037 1637 aa11□□□□□ -0.65
PFKM-232ENST00000629846 TOP2BQ02880 1626 aa11□□□□□ -0.65
PFKM-232ENST00000629846 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
PFKM-232ENST00000629846 BIVM-ERCC5R4GMW8 1640 aa10.97□□□□□ -0.65
PFKM-232ENST00000629846 CFTRP13569 1480 aa10.96□□□□□ -0.65
PFKM-232ENST00000629846 APLP2Q06481 763 aa10.96□□□□□ -0.65
PFKM-232ENST00000629846 PPARGC1BQ86YN6 1023 aaKnown RBP10.92□□□□□ -0.66
PFKM-232ENST00000629846 CLIP1P30622 1438 aa10.91□□□□□ -0.66
PFKM-232ENST00000629846 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
PFKM-232ENST00000629846 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.67
PFKM-232ENST00000629846 PRDM2Q13029 1718 aa10.89□□□□□ -0.67
PFKM-232ENST00000629846 ERICH3Q5RHP9 1530 aa10.89□□□□□ -0.67
PFKM-232ENST00000629846 CCER1Q8TC90 406 aaPredicted RBP10.88□□□□□ -0.67
PFKM-232ENST00000629846 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
PFKM-232ENST00000629846 CUX1P39880 1505 aa10.85□□□□□ -0.67
PFKM-232ENST00000629846 PRXQ9BXM0 1461 aa10.84□□□□□ -0.67
PFKM-232ENST00000629846 RAPGEF2Q9Y4G8 1499 aa10.84□□□□□ -0.67
PFKM-232ENST00000629846 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
PFKM-232ENST00000629846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
PFKM-232ENST00000629846 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.69
PFKM-232ENST00000629846 CUX2O14529 1486 aa10.74□□□□□ -0.69
PFKM-232ENST00000629846 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
PFKM-232ENST00000629846 RANGAP1P46060 587 aaPredicted RBP10.74□□□□□ -0.69
PFKM-232ENST00000629846 IGF1RP08069 1367 aa10.73□□□□□ -0.69
PFKM-232ENST00000629846 CARMIL1Q5VZK9 1371 aa10.71□□□□□ -0.69
PFKM-232ENST00000629846 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
PFKM-232ENST00000629846 DNMBPQ6XZF7 1577 aa10.7□□□□□ -0.7
PFKM-232ENST00000629846 LAMC3Q9Y6N6 1575 aa10.7□□□□□ -0.7
PFKM-232ENST00000629846 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
PFKM-232ENST00000629846 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
PFKM-232ENST00000629846 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
PFKM-232ENST00000629846 ABCA10Q8WWZ4 1543 aa10.64□□□□□ -0.71
PFKM-232ENST00000629846 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
PFKM-232ENST00000629846 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
PFKM-232ENST00000629846 CLSPNQ9HAW4 1339 aa10.63□□□□□ -0.71
PFKM-232ENST00000629846 FHAD1B1AJZ9 1412 aa10.63□□□□□ -0.71
PFKM-232ENST00000629846 ARHGAP35Q9NRY4 1499 aa10.62□□□□□ -0.71
PFKM-232ENST00000629846 CUL7Q14999 1698 aa10.61□□□□□ -0.71
PFKM-232ENST00000629846 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
PFKM-232ENST00000629846 NESP48681 1621 aa10.58□□□□□ -0.72
PFKM-232ENST00000629846 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
PFKM-232ENST00000629846 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
PFKM-232ENST00000629846 KANK4Q5T7N3 995 aaPredicted RBP10.57□□□□□ -0.72
PFKM-232ENST00000629846 EFCAB5A4FU69 1503 aa10.57□□□□□ -0.72
PFKM-232ENST00000629846 RRBP1Q9P2E9 1410 aaKnown RBP10.57□□□□□ -0.72
PFKM-232ENST00000629846 DIEXFQ68CQ4 756 aaKnown RBP10.55□□□□□ -0.72
PFKM-232ENST00000629846 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
PFKM-232ENST00000629846 AQRO60306 1485 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■■■■■ 33.8
PFKM-232ENST00000629846 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms