RNA–Protein interactions for RNA: ENST00000627474.2

UGP2-231, Transcript of UDP-glucose pyrophosphorylase 2, human

TSL 5 BASIC

Gene UGP2, Length 264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UGP2-231	ENST00000627474	AEBP2	Q6ZN18	517 aa	Predicted RBP	23.89	■■□□□ 1.41
UGP2-231	ENST00000627474	CHIC1	Q5VXU3	224 aa		23.44	■■□□□ 1.34
UGP2-231	ENST00000627474	PHF23	Q9BUL5	403 aa	Predicted RBP	20.61	■□□□□ 0.89
UGP2-231	ENST00000627474	SENP3	Q9H4L4	574 aa	Predicted RBP	20.3	■□□□□ 0.84
UGP2-231	ENST00000627474	PLPPR3	Q6T4P5	718 aa		19.1	■□□□□ 0.65
UGP2-231	ENST00000627474	FOXD1	Q16676	465 aa		18.8	■□□□□ 0.6
UGP2-231	ENST00000627474	ADRA2B	P18089	450 aa		18.15	■□□□□ 0.5
UGP2-231	ENST00000627474	PPP6R1	Q9UPN7	881 aa		18.15	■□□□□ 0.5
UGP2-231	ENST00000627474	PIAS4	Q8N2W9	510 aa	Predicted RBP	17.78	■□□□□ 0.44
UGP2-231	ENST00000627474	MSH5	O43196	834 aa		17.34	■□□□□ 0.37
UGP2-231	ENST00000627474	PPP4R3CP	Q6ZMV5	832 aa		16.83	■□□□□ 0.28
UGP2-231	ENST00000627474	SCAF1	Q9H7N4	1312 aa	Known RBP	16.65	■□□□□ 0.26
UGP2-231	ENST00000627474	KCNA4	P22459	653 aa		16.53	■□□□□ 0.24
UGP2-231	ENST00000627474	NCBP3	Q53F19	620 aa	Known RBP	16.44	■□□□□ 0.22
UGP2-231	ENST00000627474	MAPK8IP2	Q13387	824 aa	Predicted RBP	16.43	■□□□□ 0.22
UGP2-231	ENST00000627474	CNKSR2	Q8WXI2	1034 aa		16.34	■□□□□ 0.21
UGP2-231	ENST00000627474	DMRT2	Q9Y5R5	561 aa		16.21	■□□□□ 0.19
UGP2-231	ENST00000627474	NPM3	O75607	178 aa	Known RBP	16.17	■□□□□ 0.18
UGP2-231	ENST00000627474	RNF216	Q9NWF9	866 aa	Predicted RBP	16	■□□□□ 0.15
UGP2-231	ENST00000627474	HOXD11	P31277	338 aa	Predicted RBP	15.9	■□□□□ 0.14
UGP2-231	ENST00000627474	SLC4A1AP	Q9BWU0	796 aa	Known RBP	15.78	■□□□□ 0.12
UGP2-231	ENST00000627474	DNAJC5B	Q9UF47	199 aa		15.69	■□□□□ 0.1
UGP2-231	ENST00000627474	POTED	Q86YR6	584 aa		15.6	■□□□□ 0.09
UGP2-231	ENST00000627474	DCAF8L1	A6NGE4	600 aa		15.52	■□□□□ 0.08
UGP2-231	ENST00000627474	EHMT2	Q96KQ7	1210 aa		15.44	■□□□□ 0.06
UGP2-231	ENST00000627474	SLC4A2	P04920	1241 aa		15.23	■□□□□ 0.03
UGP2-231	ENST00000627474	ZBTB22	O15209	634 aa		15.21	■□□□□ 0.03
UGP2-231	ENST00000627474	FOXD4L1	Q9NU39	408 aa		15.21	■□□□□ 0.03
UGP2-231	ENST00000627474	CSRNP3	Q8WYN3	585 aa		15.19	■□□□□ 0.02
UGP2-231	ENST00000627474	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
UGP2-231	ENST00000627474	MYCN	P04198	464 aa	Predicted RBP	14.96	□□□□□ -0.01
UGP2-231	ENST00000627474		U3KPZ7	1027 aa	Predicted RBP	14.92	□□□□□ -0.02
UGP2-231	ENST00000627474	RNF39	Q9H2S5	420 aa		14.85	□□□□□ -0.03
UGP2-231	ENST00000627474	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.8	□□□□□ -0.04
UGP2-231	ENST00000627474	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.8	□□□□□ -0.04
UGP2-231	ENST00000627474	SAMD1	Q6SPF0	538 aa	Predicted RBP	14.75	□□□□□ -0.05
UGP2-231	ENST00000627474	C1QBP	Q07021	282 aa	Known RBP	14.68	□□□□□ -0.06
UGP2-231	ENST00000627474	ATXN8OS	P0DMR3	200 aa		14.67	□□□□□ -0.06
UGP2-231	ENST00000627474	APLP2	Q06481	763 aa		14.63	□□□□□ -0.07
UGP2-231	ENST00000627474	ATF5	Q9Y2D1	282 aa	Predicted RBP	14.52	□□□□□ -0.09
UGP2-231	ENST00000627474	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.47	□□□□□ -0.09
UGP2-231	ENST00000627474	CAPN15	O75808	1086 aa		14.44	□□□□□ -0.1
UGP2-231	ENST00000627474	CACNB1	Q02641	598 aa	Predicted RBP	14.4	□□□□□ -0.1
UGP2-231	ENST00000627474	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.4	□□□□□ -0.1
UGP2-231	ENST00000627474	TRH	P20396	242 aa	Predicted RBP	14.38	□□□□□ -0.11
UGP2-231	ENST00000627474	ABCB7	O75027	752 aa		14.16	□□□□□ -0.14
UGP2-231	ENST00000627474	POLA2	Q14181	598 aa		14.16	□□□□□ -0.14
UGP2-231	ENST00000627474	DSG3	P32926	999 aa		14.15	□□□□□ -0.14
UGP2-231	ENST00000627474	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.98	□□□□□ -0.17
UGP2-231	ENST00000627474	FBLN2	P98095	1184 aa		13.95	□□□□□ -0.18
UGP2-231	ENST00000627474	MKRN4P	Q13434	485 aa	Predicted RBP	13.9	□□□□□ -0.18
UGP2-231	ENST00000627474	FKBP8	Q14318	412 aa		13.75	□□□□□ -0.21
UGP2-231	ENST00000627474	OSCAR	Q8IYS5	282 aa		13.69	□□□□□ -0.22
UGP2-231	ENST00000627474	SPDYE4	A6NLX3	237 aa		13.65	□□□□□ -0.22
UGP2-231	ENST00000627474	SPDYE2B	A6NHP3	402 aa		13.59	□□□□□ -0.23
UGP2-231	ENST00000627474	SPDYE6	P0CI01	402 aa		13.59	□□□□□ -0.23
UGP2-231	ENST00000627474	SPDYE2	Q495Y8	402 aa		13.59	□□□□□ -0.23
UGP2-231	ENST00000627474	ZNF692	Q9BU19	519 aa	Predicted RBP	13.54	□□□□□ -0.24
UGP2-231	ENST00000627474	RBM42	Q9BTD8	480 aa	Known RBP	13.51	□□□□□ -0.25
UGP2-231	ENST00000627474	SSUH2	Q9Y2M2	353 aa		13.48	□□□□□ -0.25
UGP2-231	ENST00000627474	PROM2	Q8N271	834 aa		13.43	□□□□□ -0.26
UGP2-231	ENST00000627474	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
UGP2-231	ENST00000627474	AKT1S1	Q96B36	256 aa		13.35	□□□□□ -0.27
UGP2-231	ENST00000627474	FBXO3	Q9UK99	471 aa		13.26	□□□□□ -0.29
UGP2-231	ENST00000627474	REM2	Q8IYK8	340 aa	Predicted RBP	13.21	□□□□□ -0.29
UGP2-231	ENST00000627474	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.17	□□□□□ -0.3
UGP2-231	ENST00000627474	STAG3	Q9UJ98	1225 aa		13.17	□□□□□ -0.3
UGP2-231	ENST00000627474	CLEC11A	Q9Y240	323 aa		13.1	□□□□□ -0.31
UGP2-231	ENST00000627474	PITPNM1	O00562	1244 aa		13.07	□□□□□ -0.32
UGP2-231	ENST00000627474	VASP	P50552	380 aa	Predicted RBP	13.06	□□□□□ -0.32
UGP2-231	ENST00000627474	PRR29	P0C7W0	189 aa		12.99	□□□□□ -0.33
UGP2-231	ENST00000627474	PLCD3	Q8N3E9	789 aa		12.95	□□□□□ -0.34
UGP2-231	ENST00000627474	MIER1	Q8N108	512 aa		12.94	□□□□□ -0.34
UGP2-231	ENST00000627474	PLEKHG5	O94827	1062 aa		12.9	□□□□□ -0.34
UGP2-231	ENST00000627474	CHRDL2	Q6WN34	429 aa		12.9	□□□□□ -0.34
UGP2-231	ENST00000627474	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.87	□□□□□ -0.35
UGP2-231	ENST00000627474	CREBZF	Q9NS37	354 aa		12.83	□□□□□ -0.36
UGP2-231	ENST00000627474	KLHL34	Q8N239	644 aa		12.82	□□□□□ -0.36
UGP2-231	ENST00000627474	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.81	□□□□□ -0.36
UGP2-231	ENST00000627474	FXR2	P51116	673 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
UGP2-231	ENST00000627474	CHADL	Q6NUI6	762 aa		12.75	□□□□□ -0.37
UGP2-231	ENST00000627474	PIP4P2	Q8N4L2	257 aa		12.75	□□□□□ -0.37
UGP2-231	ENST00000627474	PRKAR2A	P13861	404 aa	Known RBP	12.74	□□□□□ -0.37
UGP2-231	ENST00000627474	SPOCK2	Q92563	424 aa		12.72	□□□□□ -0.37
UGP2-231	ENST00000627474	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.71	□□□□□ -0.37
UGP2-231	ENST00000627474	MNX1	P50219	401 aa	Predicted RBP	12.7	□□□□□ -0.38
UGP2-231	ENST00000627474	NPM1	P06748	294 aa	Known RBP eCLIP	12.65	□□□□□ -0.38
UGP2-231	ENST00000627474	RTN4	Q9NQC3	1192 aa	Known RBP	12.65	□□□□□ -0.38
UGP2-231	ENST00000627474	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.65	□□□□□ -0.38
UGP2-231	ENST00000627474	NUBP1	P53384	320 aa		12.59	□□□□□ -0.39
UGP2-231	ENST00000627474	RASEF	Q8IZ41	740 aa		12.52	□□□□□ -0.41
UGP2-231	ENST00000627474	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.52	□□□□□ -0.41
UGP2-231	ENST00000627474	FAM212A	Q96EL1	285 aa		12.51	□□□□□ -0.41
UGP2-231	ENST00000627474	GSE1	Q14687	1217 aa		12.5	□□□□□ -0.41
UGP2-231	ENST00000627474	DCAF8	Q5TAQ9	597 aa		12.48	□□□□□ -0.41
UGP2-231	ENST00000627474	PKD2	Q13563	968 aa		12.47	□□□□□ -0.41
UGP2-231	ENST00000627474	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.43	□□□□□ -0.42
UGP2-231	ENST00000627474	PAK3	O75914	559 aa	Predicted RBP	12.42	□□□□□ -0.42
UGP2-231	ENST00000627474	TRIM41	Q8WV44	630 aa		12.41	□□□□□ -0.42
UGP2-231	ENST00000627474	ECM2	O94769	699 aa	Predicted RBP	12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 117 ms